PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY00508.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

SBP

Protein Properties

Length: 355aa MW: 38168.3 Da PI: 9.1177

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY00508.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	138.4	2e-43	68	144	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC++dls+ak y++rhkvC +hsk+p+v+v+gl+qrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ RDY00508.1 68 RCQVEGCKVDLSDAKAYYSRHKVCGMHSKSPTVIVAGLQQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPP 144 6**************************************************************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MSSDKLSSSE SLNGLKFGQK IYFEDVSLAT PPTSLTSSSL ATSSSSSSSS SSSRKGRAGS 60 VQPPQPPRCQ VEGCKVDLSD AKAYYSRHKV CGMHSKSPTV IVAGLQQRFC QQCSRFHQLP 120 EFDQGKRSCR RRLAGHNERR RKPPPSSLLT SRYARFSSSA FDNSGRSGNF LMELASYPKL 180 SLRNSLPTPR SSELAPGNQT STLSWQSSSE TPSDLFLQGS VGGTSFAGPG HPPGESYTGV 240 TDSSCALSLL SSQTWGSRNT APSLGLNNMI NFNGTPMTHL AASSHGASIH QLPNTSWCFK 300 GIDTGNCSPE VVPDLGLGQI SQPLNSQIPG ELDLSHQGRR HYMDLEQSRA YESAH

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MSSDKLSSSE SLNGLKFGQK IYFEDVSLAT PPTSLTSSSL ATSSSSSSSS SSSRKGRAGS  60
VQPPQPPRCQ VEGCKVDLSD AKAYYSRHKV CGMHSKSPTV IVAGLQQRFC QQCSRFHQLP  120
EFDQGKRSCR RRLAGHNERR RKPPPSSLLT SRYARFSSSA FDNSGRSGNF LMELASYPKL  180
SLRNSLPTPR SSELAPGNQT STLSWQSSSE TPSDLFLQGS VGGTSFAGPG HPPGESYTGV  240
TDSSCALSLL SSQTWGSRNT APSLGLNNMI NFNGTPMTHL AASSHGASIH QLPNTSWCFK  300
GIDTGNCSPE VVPDLGLGQI SQPLNSQIPG ELDLSHQGRR HYMDLEQSRA YESAH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	7e-71	SBP family protein