PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY00097.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 515aa MW: 55870.4 Da PI: 9.197

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY00097.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.1e-05	62	84	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H RDY00097.1 62 FICEICNKGFQRDQNLQLHRRGH 84 89*******************88 PP
2	zf-C2H2	13.9	0.00016	138	160	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ RDY00097.1 138 WKCEKCSKKYAVQSDWKAHTKTC 160 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MQMIPGDPFS LPTSLAGLAS EQNPNPNPPP PTKKKRNLPG TPDPDAEVIA LSPKTLMATN 60 RFICEICNKG FQRDQNLQLH RRGHNLPWKL RQRSNKEVRK KVYICPEKTC VHHDAARALG 120 DLTGIKKHYS RKHGEKKWKC EKCSKKYAVQ SDWKAHTKTC GTREYKCDCG TLFSRKDSFI 180 THRAFCDALA EESSRLSSVA TTSLNFRSEE ATAMNTQASL SSRGLITGQG MQNVPQFGPH 240 GFRLMGMCAD QQRPNLSLWL NQGNHHINNP LDVASSSSSG LNLPEVVHMA QANNSLLGSS 300 SLFSNFGMPA SNSSSPNISL SPHLKKGEGG ASDFASIYSE SQNNNSNSAS PMSATALLQK 360 AAQMGSTRST NPSIFSGSFG VMSSSSTQTT SLTSNNNANQ SCDQLNQAFQ NMNQHENFNA 420 TSSGATMLGS STNLSSLAHS SNGFDQFLMQ NNVEPSEVEQ LKLHPGSNTV EHNLTRDFLG 480 MSRGGGGHPF LPQELAKFAS LGSSMGLNQF TAGHQ

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MQMIPGDPFS LPTSLAGLAS EQNPNPNPPP PTKKKRNLPG TPDPDAEVIA LSPKTLMATN  60
RFICEICNKG FQRDQNLQLH RRGHNLPWKL RQRSNKEVRK KVYICPEKTC VHHDAARALG  120
DLTGIKKHYS RKHGEKKWKC EKCSKKYAVQ SDWKAHTKTC GTREYKCDCG TLFSRKDSFI  180
THRAFCDALA EESSRLSSVA TTSLNFRSEE ATAMNTQASL SSRGLITGQG MQNVPQFGPH  240
GFRLMGMCAD QQRPNLSLWL NQGNHHINNP LDVASSSSSG LNLPEVVHMA QANNSLLGSS  300
SLFSNFGMPA SNSSSPNISL SPHLKKGEGG ASDFASIYSE SQNNNSNSAS PMSATALLQK  360
AAQMGSTRST NPSIFSGSFG VMSSSSTQTT SLTSNNNANQ SCDQLNQAFQ NMNQHENFNA  420
TSSGATMLGS STNLSSLAHS SNGFDQFLMQ NNVEPSEVEQ LKLHPGSNTV EHNLTRDFLG  480
MSRGGGGHPF LPQELAKFAS LGSSMGLNQF TAGHQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	89	101	KLRQRSNKEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03150.1	1e-107	C2H2 family protein