PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX99237.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

TCP

Protein Properties

Length: 402aa MW: 45374.1 Da PI: 9.9434

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX99237.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	145.8	3e-45	97	227	2	130
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssgkaaksaaks 97 ++kkdrhskihT++g+RdRRvRls+e+a++fFdLqd+LGfdk+s+t++WL++++k+aikelt+++ s s+ ++e +++s ++ +++ + ++ RDX99237.1 97 TTKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKELTRSKHSVDSFEfssSSEGEVVSMIHQDLQQQGVDL-EE 194 78************************************************************55555222323233333333334444333333.55 PP TCP 98 kksqksaasalnlakesrakarararertrekm 130 +k ++++ ++++++kesr+karararert++k RDX99237.1 195 RKFKEPSYCVRAKMKESREKARARARERTSSKI 227 5556666789*****************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MFPSSNYTSS GSYPRFPSSS SSSTSPYPSF TFLHPENSSG SNIFHHDPLA VAYIPSHYHA 60 PIPETLANWA VADCAAMLNQ DLGGALSGIT KKPAKKTTKK DRHSKIHTSQ GLRDRRVRLS 120 IEIARKFFDL QDMLGFDKAS NTLDWLFTKS KKAIKELTRS KHSVDSFEFS SSSEGEVVSM 180 IHQDLQQQGV DLEERKFKEP SYCVRAKMKE SREKARARAR ERTSSKILSN ISSGEGKVQE 240 FKKKCPATEN SQILNQLRSP LQPHPQDVGG EVPRDGDLNI IEESIVIKRK LKHTLMSSVH 300 HQNAVIPKEA SVNHSDYHSF PNFSPNWEAN SGSTGRSTFC AIASMNLSTD QPRACDSWQK 360 RVLRISIVRE NRQQYVFLVG HNEQAYVRLG CIKYRRYIHT SD

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MFPSSNYTSS GSYPRFPSSS SSSTSPYPSF TFLHPENSSG SNIFHHDPLA VAYIPSHYHA  60
PIPETLANWA VADCAAMLNQ DLGGALSGIT KKPAKKTTKK DRHSKIHTSQ GLRDRRVRLS  120
IEIARKFFDL QDMLGFDKAS NTLDWLFTKS KKAIKELTRS KHSVDSFEFS SSSEGEVVSM  180
IHQDLQQQGV DLEERKFKEP SYCVRAKMKE SREKARARAR ERTSSKILSN ISSGEGKVQE  240
FKKKCPATEN SQILNQLRSP LQPHPQDVGG EVPRDGDLNI IEESIVIKRK LKHTLMSSVH  300
HQNAVIPKEA SVNHSDYHSF PNFSPNWEAN SGSTGRSTFC AIASMNLSTD QPRACDSWQK  360
RVLRISIVRE NRQQYVFLVG HNEQAYVRLG CIKYRRYIHT SD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	2e-28	TCP family protein