PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RDX97666.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 124aa MW: 13978.8 Da PI: 6.8062 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.8 | 1e-07 | 48 | 94 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 g+W++ + + + +a + + ++ +W+ +a+ + g+t++++k ++ RDX97666.1 48 GSWSAKDNKAFERALAVYDKDtpdRWNNVASAVA-GKTPEEVKRHYEL 94 89********************************.**********976 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 124 aa Download sequence |
MKDTDSAMLL LNFLFLLYSV QDLQAKPSQV PPYTHIRGMA SSSMSATGSW SAKDNKAFER 60 ALAVYDKDTP DRWNNVASAV AGKTPEEVKR HYELLLRDIS HIESGQVPFP NYKKTAVSDE 120 EEKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G39250.1 | 3e-31 | MYB_related family protein |