PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX96486.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | LBD | ||||||||
Protein Properties | Length: 220aa MW: 23920.6 Da PI: 7.2854 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 136 | 1.4e-42 | 67 | 166 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++k+l++lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q+++l+a+la++++ RDX96486.1 67 PCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQA 165 7**********************************************************************************************9997 PP DUF260 100 e 100 e RDX96486.1 166 E 166 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MEYKVKTTTS SPPIPIHVPT MLSNSPPSSS SSPPSQSPTP FPSPSQGSPS AAPPSPPPPP 60 PPVVVSPCAA CKILRRRCVE KCVLAPYFPP TDPLKFTIAH RVFGASNIIK FLQELPESQR 120 ADAVSSMVYE ANARIRDPVY GCAGAICQLQ KQVSELQAQL AKAQAEVVNM QCQQANLVAL 180 ICMEMRQSPD QHMLQPQPHV DMSCFIEDNT FGTAWEPLWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 4e-66 | LBD family protein |