PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX96296.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

WOX

Protein Properties

Length: 404aa MW: 44985.1 Da PI: 7.6996

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX96296.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.9	1.5e-17	55	115	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p +ee++++ +l ++ +++V++WFqNr+ + k+ RDX96296.1 55 KPRWNPKPEQIRILETIFNSgMVNPPREEIRKIRVQLqeygQVGDANVFYWFQNRKSRSKH 115 89***************99***********************************995 PP
2	Wus_type_Homeobox	110.4	1e-35	54	116	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P++eei++i+ +L+eyG+++d+NVfyWFQNrk+R+++k RDX96296.1 54 PKPRWNPKPEQIRILETIFNSGMVNPPREEIRKIRVQLQEYGQVGDANVFYWFQNRKSRSKHK 116 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MSSSNRHWPS MFKSKPCNPH NQWQHDINSS LVSTGCQRSP YNSAAGGEER SPEPKPRWNP 60 KPEQIRILET IFNSGMVNPP REEIRKIRVQ LQEYGQVGDA NVFYWFQNRK SRSKHKLRHL 120 QNSKNHNSAA SLTQITPPSS SSSSSDKSSS KELVHPNGFS FGFSNINDAV PNSPTASVNQ 180 NYFHPHNHND TNLLPPAAEP FSFPMQNNGQ GAVTTNAMTT TLGFCFSDFS NNMMQSQPQC 240 QQNAGPCTSL MINEIMNHGT SSKRDQDPDK AMKIPHHHPQ HPQHPQLNFS LTSTPATTVI 300 PPITNTPISV PCPITQLQGV CETASGGAKY TVFINDVPFE VAVGPINVRQ VFGDEAVLIH 360 SSGHPVPTDE WGVTLHALQH GAYYYLVCIF KEVRLEEDHR SQIY

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MSSSNRHWPS MFKSKPCNPH NQWQHDINSS LVSTGCQRSP YNSAAGGEER SPEPKPRWNP  60
KPEQIRILET IFNSGMVNPP REEIRKIRVQ LQEYGQVGDA NVFYWFQNRK SRSKHKLRHL  120
QNSKNHNSAA SLTQITPPSS SSSSSDKSSS KELVHPNGFS FGFSNINDAV PNSPTASVNQ  180
NYFHPHNHND TNLLPPAAEP FSFPMQNNGQ GAVTTNAMTT TLGFCFSDFS NNMMQSQPQC  240
QQNAGPCTSL MINEIMNHGT SSKRDQDPDK AMKIPHHHPQ HPQHPQLNFS LTSTPATTVI  300
PPITNTPISV PCPITQLQGV CETASGGAKY TVFINDVPFE VAVGPINVRQ VFGDEAVLIH  360
SSGHPVPTDE WGVTLHALQH GAYYYLVCIF KEVRLEEDHR SQIY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	4e-83	WOX family protein