PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX96048.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 285aa MW: 32209.7 Da PI: 7.5942 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.1 | 2e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l ++v+ +G+g+W++ ++ g+ R++k+c++rw +yl RDX96048.1 14 KGPWTPEEDLKLTNYVQIHGPGNWRSLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.9 | 8.5e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE++ +++++ lG++ W++Ia++++ gRt++++k++w+++ RDX96048.1 67 RGRFSLEEEDTIIQLHSFLGNK-WSAIAAKLP-GRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MGRVPCCDKT GLKKGPWTPE EDLKLTNYVQ IHGPGNWRSL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SLEEEDTIIQ LHSFLGNKWS AIAAKLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHAPRL DLLDMPSILR SVLGAHVLMN PGLLKLPATA TATASLLPRN YLQNQVTPPL 180 DLTQLHIPMS STPSSENLVL QQNQVDLVGN YYPDLEHFLN NANQNMGYDS VLPTPVSSPH 240 RLNSLSAYVR NGAEEETESY HDLFEFEIPQ SLDMADIFCN VTQTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 1e-91 | MYB family protein |