PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX94285.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family ARF
Protein Properties Length: 720aa    MW: 79793.7 Da    PI: 6.8153
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX94285.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.32.9e-23132232198
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++ +k+a+e+       +   + +++l  +d++g +W++k+iyr++++r++lt+GW+ Fv +++L +gD +vF   + + ++l
  RDX94285.1 132 FCKILTASDTSTHGGFSVLRKHATEClppldmtQ--ATPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTFVASKRLVAGDAFVFL--RGEHGQL 226
                 99****************************9543..445569************************************************..4489999 PP

                 EEEEE- CS
          B3  93 vvkvfr 98 
                 +v+v+r
  RDX94285.1 227 RVGVRR 232
                 ****98 PP

2Auxin_resp100.62.2e-33258337183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha+ t+++F v+Y+Pr+  s+F+v ++k+++a+++k+ vGmRfkm+fe++ds+err+sGt+vg  d++p  W+nS+WrsLk
  RDX94285.1 258 ASHAVMTRTMFLVYYKPRT--SQFIVGLNKYLEAVNNKFLVGMRFKMRFEGDDSPERRFSGTIVGAGDVSP-GWSNSQWRSLK 337
                 689***************6..9*************************************************.*********96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 720 aa     Download sequence    
MAHLECNLRG PGSGSSQPEK GLKDDDLYRE LWKLCAGPLV DVPRTGDRVF YFPQGHMEQL  60
QASTDQELNQ EIPHFNLPSK IFCRVVNIQL LAEQDTDEVY ACIALLPESD QTEPANPDPS  120
VSEAPKQKFH SFCKILTASD TSTHGGFSVL RKHATECLPP LDMTQATPTQ ELAAKDLHGF  180
EWKFKHIYRG QPRRHLLTTG WSTFVASKRL VAGDAFVFLR GEHGQLRVGV RRLARQQSPM  240
PSSVISSQSM HLGVLATASH AVMTRTMFLV YYKPRTSQFI VGLNKYLEAV NNKFLVGMRF  300
KMRFEGDDSP ERRFSGTIVG AGDVSPGWSN SQWRSLKVQW DEPATIPRPE RVSCWEIEPF  360
VASTALNVTQ PAVKGKRSRP ADVSSSGGRL VLTASGFWYH GSSHSHELTQ LGAATAEVQS  420
KENQVVACSL RQKDINSNNP INANNSSSSS RVRVEGVWSS PHLNVTSNLF SDPNNNNGTS  480
ALSSISTYPN VPSKSSDGPT CDRVEDGKKT ENPLDCWLFG VNLSNNCSNV ISPSSEREVR  540
GPSSSIVPSG PKESIPAAAC ETERVQSPNY SLSNKGQKQI ISEASPIEWQ NKQATVPSMR  600
TRIKVQMQGV AVGRAFDLTT LSGYDDLIDE LEKLFDIRGE LRSQNKWAVT FTDDENDMML  660
AGDDPWLEFC NIVKRIFICS REDLKKMKCC KLPASSSEVE ETLLSPDSQN RDETQQSQMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23980.20.0ARF family protein