PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RDX93853.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
Family | GeBP | ||||||||
Protein Properties | Length: 225aa MW: 25649.1 Da PI: 10.2147 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 102.8 | 2.9e-32 | 51 | 147 | 1 | 97 |
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 k+fqr+wseeDe ++L+G+ +f +ktg++p+ +af++fvkks+++++s ql eKirr+KkKf++++++ k gk+p+fsk+ dq ++el kk+Wg RDX93853.1 51 KMFQRVWSEEDEHAILKGMAEFISKTGQEPYRYAEAFHNFVKKSLHAEASIMQLKEKIRRMKKKFETNSRRGKIGKDPRFSKPLDQIAYELGKKVWG 147 58**********************************************************************************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 225 aa Download sequence |
MSKSGVKRTA QNNTHVADPK PGKKKSSNAS SSSATNNETK QEDKKKSGLT KMFQRVWSEE 60 DEHAILKGMA EFISKTGQEP YRYAEAFHNF VKKSLHAEAS IMQLKEKIRR MKKKFETNSR 120 RGKIGKDPRF SKPLDQIAYE LGKKVWGEEA HGLVEKPKPI GKKVANTPKK EDATSKNVSI 180 PETKTHPEEL EPEPEPERME YYLLLYYVES LSKFRTSIDS TTNQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G61730.1 | 1e-21 | GeBP family protein |