PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX92912.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 465aa MW: 52342.6 Da PI: 8.7918

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX92912.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.5	5.5e-06	57	79	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H RDX92912.1 57 YVCEICNQGFQRDQNLQMHRRRH 79 9*********************9 PP
2	zf-C2H2	14.4	0.00011	134	156	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k + +s++k H++t+ RDX92912.1 134 WVCERCSKGYAVQSDYKAHLKTC 156 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MLANNLSPSS VPTSEPFPCT ENGTATNKRK RRPAGTPDPD AEVVSLSPKT LLESDRYVCE 60 ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET PVVRKRVFVC PEPTCLHHDP CHALGDLVGI 120 KKHFRRKHSN HKQWVCERCS KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD 180 ACNMGRLRPE SQPLQPSACL SRTASSPSPS SETNFSTAPW PTRMIIPKPT EQHTIFMNNP 240 TTAITNAETS SKNNKLHPNL DLQLSTPITT INNNTNTNTS NIANPIDATS LSPKRDHHEN 300 HSTHLQLSIG SSDMSEKNES NRNSSENSNN DQKQSNMALL RVQEQAREHL RIAMAEKAYA 360 EEARKQAKRQ IELAEQEFTN AKRIRQQAQA ELDKAYALKE HAMKQINSTM LQITCHACKQ 420 QFQARNHATP DENSLVLSYV SSAITTEGGE VENDNGKDHV HGKQN

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MLANNLSPSS VPTSEPFPCT ENGTATNKRK RRPAGTPDPD AEVVSLSPKT LLESDRYVCE  60
ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET PVVRKRVFVC PEPTCLHHDP CHALGDLVGI  120
KKHFRRKHSN HKQWVCERCS KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD  180
ACNMGRLRPE SQPLQPSACL SRTASSPSPS SETNFSTAPW PTRMIIPKPT EQHTIFMNNP  240
TTAITNAETS SKNNKLHPNL DLQLSTPITT INNNTNTNTS NIANPIDATS LSPKRDHHEN  300
HSTHLQLSIG SSDMSEKNES NRNSSENSNN DQKQSNMALL RVQEQAREHL RIAMAEKAYA  360
EEARKQAKRQ IELAEQEFTN AKRIRQQAQA ELDKAYALKE HAMKQINSTM LQITCHACKQ  420
QFQARNHATP DENSLVLSYV SSAITTEGGE VENDNGKDHV HGKQN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	28	33	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-155	C2H2 family protein