PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX92873.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | Whirly | ||||||||
Protein Properties | Length: 268aa MW: 29725.7 Da PI: 9.8004 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 201.6 | 9.9e-63 | 91 | 229 | 1 | 139 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePl 99 s+yk+kaal++ ++ p+f ldsg+ k++++G +ll++a+a++ r+ydW++kq+f+ls+ e++++++l+++esceffhdp +++s+eGkvrk+lk+ePl RDX92873.1 91 SIYKGKAALTLTPRPPEFAPLDSGAYKVSKEGYVLLQFAPAVGMRQYDWNRKQVFSLSVGEMGSVISLGARESCEFFHDPLKGKSDEGKVRKVLKLEPL 189 7************************************************************************************************** PP Whirly 100 pdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139 pdGsG+f+nlsv+n+lv+++e++ +P++kae avl s ++ RDX92873.1 190 PDGSGHFFNLSVQNKLVNVDENIFIPITKAELAVLSSTFN 229 ***********************************99885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MSNLQLQLHS PPSLLSSSSL SSSSSSSSYL KLFPNQSFSS KSLPFRNPKP FTLRCRHSDL 60 FDQNALASTQ RPTRPTASVG ALPPRVYVGY SIYKGKAALT LTPRPPEFAP LDSGAYKVSK 120 EGYVLLQFAP AVGMRQYDWN RKQVFSLSVG EMGSVISLGA RESCEFFHDP LKGKSDEGKV 180 RKVLKLEPLP DGSGHFFNLS VQNKLVNVDE NIFIPITKAE LAVLSSTFNF IMPYLLGWHT 240 FANSIKPDDY SGTNNANPRY GGDYEWNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14410.1 | 1e-114 | Whirly family protein |