PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX92873.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family Whirly
Protein Properties Length: 268aa    MW: 29725.7 Da    PI: 9.8004
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX92873.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly201.69.9e-63912291139
      Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePl 99 
                 s+yk+kaal++ ++ p+f  ldsg+ k++++G +ll++a+a++ r+ydW++kq+f+ls+ e++++++l+++esceffhdp +++s+eGkvrk+lk+ePl
  RDX92873.1  91 SIYKGKAALTLTPRPPEFAPLDSGAYKVSKEGYVLLQFAPAVGMRQYDWNRKQVFSLSVGEMGSVISLGARESCEFFHDPLKGKSDEGKVRKVLKLEPL 189
                 7************************************************************************************************** PP

      Whirly 100 pdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
                 pdGsG+f+nlsv+n+lv+++e++ +P++kae avl s ++
  RDX92873.1 190 PDGSGHFFNLSVQNKLVNVDENIFIPITKAELAVLSSTFN 229
                 ***********************************99885 PP

Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MSNLQLQLHS PPSLLSSSSL SSSSSSSSYL KLFPNQSFSS KSLPFRNPKP FTLRCRHSDL  60
FDQNALASTQ RPTRPTASVG ALPPRVYVGY SIYKGKAALT LTPRPPEFAP LDSGAYKVSK  120
EGYVLLQFAP AVGMRQYDWN RKQVFSLSVG EMGSVISLGA RESCEFFHDP LKGKSDEGKV  180
RKVLKLEPLP DGSGHFFNLS VQNKLVNVDE NIFIPITKAE LAVLSSTFNF IMPYLLGWHT  240
FANSIKPDDY SGTNNANPRY GGDYEWNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14410.11e-114Whirly family protein