PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX92872.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 411aa MW: 46553.9 Da PI: 9.7532

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX92872.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	22	4.1e-07	89	139	7	55
AP2 7 rwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 ++++++gr++A+++d ++n k+k + g + +e Aa+a++ a++k++g RDX92872.1 89 SRHRWTGRFEAHLWDkGTWNPtqKKKGKQ-GAYNDEEAAARAYDLAALKYWG 139 589**********87777785557777.666666************98 PP
2	AP2	52.3	1.4e-16	182	233	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g RDX92872.1 182 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 233 89**99******99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MELAPVKSEL SPRSHRLLMV DGSEVVATKC VKRRRRDSSS MAVLGGNGQQ GEQLEEQKQL 60 GGPSTATTVK RSSRFRGVSR QLSTFFLWSR HRWTGRFEAH LWDKGTWNPT QKKKGKQGAY 120 NDEEAAARAY DLAALKYWGT STFTNFPVSD YENEIEIMKT VTKEEYLASL RRRSSGFSRG 180 VSKYRGVARH HHNGRWEARI GRVFGNKYLY LGTYSTQEEA ARAYDIAAIE YRGINAVTNF 240 DLSTYIRWLR PGTHPTSSQD QKRTDPQPFA TPNSIQTRRN IEVSMHSFPS GELDSTKKQE 300 FSKYMTPLSS YSKPSSPTAL GLLLKSSVFR ELMQRNLNSS SEEAEEVELK YPQEVNEGIG 360 GIYDNDNTSN SCFCSSNINR LHNLESSEES PLPMYHGAVK SLWNGAFNMS N

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MELAPVKSEL SPRSHRLLMV DGSEVVATKC VKRRRRDSSS MAVLGGNGQQ GEQLEEQKQL  60
GGPSTATTVK RSSRFRGVSR QLSTFFLWSR HRWTGRFEAH LWDKGTWNPT QKKKGKQGAY  120
NDEEAAARAY DLAALKYWGT STFTNFPVSD YENEIEIMKT VTKEEYLASL RRRSSGFSRG  180
VSKYRGVARH HHNGRWEARI GRVFGNKYLY LGTYSTQEEA ARAYDIAAIE YRGINAVTNF  240
DLSTYIRWLR PGTHPTSSQD QKRTDPQPFA TPNSIQTRRN IEVSMHSFPS GELDSTKKQE  300
FSKYMTPLSS YSKPSSPTAL GLLLKSSVFR ELMQRNLNSS SEEAEEVELK YPQEVNEGIG  360
GIYDNDNTSN SCFCSSNINR LHNLESSEES PLPMYHGAVK SLWNGAFNMS N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	109	117	PTQKKKGKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	2e-64	AP2 family protein