PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX92618.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 278aa MW: 31552.2 Da PI: 5.9904

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX92618.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57	3.2e-18	75	128	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k RDX92618.1 75 KKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 128 456899***********************************************9 PP
2	HD-ZIP_I/II	131.3	3.7e-42	74	164	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqvk+LE+sFe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+y+a+k++n++L++++++L++e+ RDX92618.1 74 EKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADNDALQAHNQKLQTEI 164 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MAFFPTNFML QTPHQDDHQP PPSLNSIITS CAPQEYHGGA SFLGKRSMSF SGIELGEEAN 60 AEEDLSDDGS QAGEKKRRLN MEQVKTLEKS FELGNKLEPE RKMQLARALG LQPRQIAIWF 120 QNRRARWKTK QLEKDYDLLK RQYEAVKADN DALQAHNQKL QTEILALKSR EPTESINLNK 180 ETEGSSSNRS ENSSEIKLDI SRTPAIDSPL STQQNSKSLF PSSARPTGVA QLFQTTSRPD 240 LQCQKIDHMV KEESLSNMFC GIDDQSGLWP WLEQQHFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	123	131	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-107	HD-ZIP family protein