PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX91985.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 689aa MW: 75847.7 Da PI: 6.7274

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX91985.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.1	3.2e-11	258	314	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g RDX91985.1 258 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 314 57*****************4444.2455535555.779999************98 PP
2	AP2	46.3	1.1e-14	357	408	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g RDX91985.1 357 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 408 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MGSMNLLGFS LSPQEQQHPS SQDHSQTAPS RFGFNPDGIS STDVAGDCFD LTSDSTPHLL 60 NLPSYGIYEA FHRNNNIHTT QDWKENYNSQ NLLLGTSCSN QNMNHNQQQP KLENFLGGHS 120 FGDHEHQTYG GNSASTDYMF PPQPVTASGG NVGGSTGNSI GLSMIKTWLR NQPPHSENNN 180 NNESGGNIKS SVQTLSLSMS TGSQSSSSLP LLTASVDGES SSDNKQPLTT VAPDTTQTGV 240 AIETAPRKSI DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS CRREGQTRKG RQGGYDKEEK 300 AARAYDLAAL KYWGTTTTTN FPISHYEKEL EEMKHMTRQE YVASLRRKSS GFSRGASIYR 360 GVTRHHQHGR WQARIGRVAG NKDLYLGTFS TQEEAAEAYD VAAIKFRGLS AVTNFDMSRY 420 DVKSILESTT LPIGGAAKRL KDMEQVELNV EGHRAENQED HSIMNSHLTQ GINNNYAGGT 480 TTHHNWHNVL AFHQPQPCTT IHYPYGQRLW CKQEQQDNNS DVSHPLSYQD IHQLQLGNNN 540 THNFFHSNSG LHPLMSMDSA SIDNSSSSNS VVYDGYGGGG GYVIPMGTVV ASDGDQHQRG 600 NNNGFGDNEI KALGYESVYG STDPYHAHAR NLYYLSQQQS SSVDAVKTSA YDQGSACNTW 660 VPTAIPTLAP RSTSMSLCHG APPFSLLHE

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MGSMNLLGFS LSPQEQQHPS SQDHSQTAPS RFGFNPDGIS STDVAGDCFD LTSDSTPHLL  60
NLPSYGIYEA FHRNNNIHTT QDWKENYNSQ NLLLGTSCSN QNMNHNQQQP KLENFLGGHS  120
FGDHEHQTYG GNSASTDYMF PPQPVTASGG NVGGSTGNSI GLSMIKTWLR NQPPHSENNN  180
NNESGGNIKS SVQTLSLSMS TGSQSSSSLP LLTASVDGES SSDNKQPLTT VAPDTTQTGV  240
AIETAPRKSI DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS CRREGQTRKG RQGGYDKEEK  300
AARAYDLAAL KYWGTTTTTN FPISHYEKEL EEMKHMTRQE YVASLRRKSS GFSRGASIYR  360
GVTRHHQHGR WQARIGRVAG NKDLYLGTFS TQEEAAEAYD VAAIKFRGLS AVTNFDMSRY  420
DVKSILESTT LPIGGAAKRL KDMEQVELNV EGHRAENQED HSIMNSHLTQ GINNNYAGGT  480
TTHHNWHNVL AFHQPQPCTT IHYPYGQRLW CKQEQQDNNS DVSHPLSYQD IHQLQLGNNN  540
THNFFHSNSG LHPLMSMDSA SIDNSSSSNS VVYDGYGGGG GYVIPMGTVV ASDGDQHQRG  600
NNNGFGDNEI KALGYESVYG STDPYHAHAR NLYYLSQQQS SSVDAVKTSA YDQGSACNTW  660
VPTAIPTLAP RSTSMSLCHG APPFSLLHE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-129	AP2 family protein