PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX90484.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 345aa MW: 38844.6 Da PI: 6.5507

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX90484.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.6	5.7e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+++++ g+ R++k+c++rw +yl RDX90484.1 14 RGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	47.5	4.1e-15	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++++E l+++++ lG++ W+ Ia++++ gRt++++k++w+ RDX90484.1 67 RGSFSPQEAALIIELHSVLGNR-WAQIAKHLP-GRTDNEVKNFWN 109 899*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MGHHSCCNKQ KVKRGLWSPE EDEKLINYIT TYGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGSF SPQEAALIIE LHSVLGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLLSHD 120 VIPPLATFSD FHSPGNIGSM ESLFPFAANP NVILNFHHHQ DQLYLPTPSP IFDHNNDIKL 180 DINNYNANNF LHIQNPIPET VLPSSNPSSY EDTWSLGSVA LHLNANQENQ ISKSDNTSHY 240 VVDKFINPVS LQQYECHHLV EPLVPKLISE SIEDYVCSIP YSSTSQEQHE PTPKFQCYPQ 300 DLTVAANQLE YIDAFMSSLP SSTTSSSVSS SQVVTNPIIP SGWEP

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MGHHSCCNKQ KVKRGLWSPE EDEKLINYIT TYGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGSF SPQEAALIIE LHSVLGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLLSHD  120
VIPPLATFSD FHSPGNIGSM ESLFPFAANP NVILNFHHHQ DQLYLPTPSP IFDHNNDIKL  180
DINNYNANNF LHIQNPIPET VLPSSNPSSY EDTWSLGSVA LHLNANQENQ ISKSDNTSHY  240
VVDKFINPVS LQQYECHHLV EPLVPKLISE SIEDYVCSIP YSSTSQEQHE PTPKFQCYPQ  300
DLTVAANQLE YIDAFMSSLP SSTTSSSVSS SQVVTNPIIP SGWEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	2e-81	MYB family protein