PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX88939.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

WRKY

Protein Properties

Length: 471aa MW: 52110 Da PI: 8.7143

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX88939.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	76	4.4e-24	163	219	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk+ +rsYYrCt+++C++kk ++ +++ ++v+ei+Y+++H h+ RDX88939.1 163 SDGYNWRKYGQKQVKSPMGSRSYYRCTHSNCCAKK-IKFCDHSGHVIEIVYKSQHSHD 219 7******************************98.999999*************7 PP
2	WRKY	29.2	1.8e-09	366	385	3	22
-SS-EEEEEEE--TT-SS-E CS WRKY 3 DgynWrKYGqKevkgsefpr 22 Dgy+WrKYGqK vkg+++ r RDX88939.1 366 DGYRWRKYGQKLVKGNPHFR 385 9***************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MEEEEETQHH RVTDSSLTAE SLASTPSDEA PPNSETLVLY SSSFPHHHAA YMQGSITARK 60 GGKAENKESA RPPDKETIVK DAVEAPQKQT ENQLQVSVCS TSLSELSPTS VSQSLSSAPS 120 PTVPEQRLSP PKANSVQVLK VDNRTPSGGT TLSSVSVARE SASDGYNWRK YGQKQVKSPM 180 GSRSYYRCTH SNCCAKKIKF CDHSGHVIEI VYKSQHSHDP PHKIESPKES ELLPSCKPKV 240 ESSVPKQSIR VLTDSDPSSS PKESLQEAPC STDKNLENSS NGENGKVILK EEHVTDPEPK 300 RRQVACEFIF FTGNNLKNKY FFLIVAGPNG LILNKGDLTC LDSAVKPGKK PKFVVHAAED 360 VGISGDGYRW RKYGQKLVKG NPHFRIKECL LMLACMSPFN ILRMLYPLWK RVSIKVGLIG 420 SSRECRWDIT VNVIPFCCTS SSYKELQVDD SKLRTQSKDN LKITKQALMT L

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MEEEEETQHH RVTDSSLTAE SLASTPSDEA PPNSETLVLY SSSFPHHHAA YMQGSITARK  60
GGKAENKESA RPPDKETIVK DAVEAPQKQT ENQLQVSVCS TSLSELSPTS VSQSLSSAPS  120
PTVPEQRLSP PKANSVQVLK VDNRTPSGGT TLSSVSVARE SASDGYNWRK YGQKQVKSPM  180
GSRSYYRCTH SNCCAKKIKF CDHSGHVIEI VYKSQHSHDP PHKIESPKES ELLPSCKPKV  240
ESSVPKQSIR VLTDSDPSSS PKESLQEAPC STDKNLENSS NGENGKVILK EEHVTDPEPK  300
RRQVACEFIF FTGNNLKNKY FFLIVAGPNG LILNKGDLTC LDSAVKPGKK PKFVVHAAED  360
VGISGDGYRW RKYGQKLVKG NPHFRIKECL LMLACMSPFN ILRMLYPLWK RVSIKVGLIG  420
SSRECRWDIT VNVIPFCCTS SSYKELQVDD SKLRTQSKDN LKITKQALMT L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	2e-56	WRKY family protein