PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX88593.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

GATA

Protein Properties

Length: 539aa MW: 59297.3 Da PI: 6.1645

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX88593.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	47.5	2.4e-15	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+ +TplWR+gp ++ LCnaCG ++r kg+ RDX88593.1 7 CYHCGVASTPLWRNGPPEKPVLCNACGSRWRTKGT 41 **************88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MGKQGPCYHC GVASTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAENVDCEDQ 60 KVSRVKSISL NKNKEVKLVK RKQNCDNAAS GGFVPDYNQG YRKVVDEDTS NRSSSGSAVS 120 NSESCAQFGG TDASDLTGPA QSVVWDATVP SKKRTCAGRP KASSVEKLTR DLCTILHEQQ 180 SYFSASSEED LLFESDTPMV SVEIGHGSIL IRHPSSIARD EESEASSLSV DNKQCLLNEA 240 YSCSGTIPVH SDRSGMNFSF HGVEKSRNSA GQIMQQEQLG RHVFPNQDKS QLEKLQTSGN 300 HDSLLCLIDL NDVVNYEEFM RNLTPEEQQQ LLKYLPVVDT AKFPDSLKNM FNSFQFKENL 360 TYFQQLLAEG VFDVSMLGEE PEEWKTTLES LVLSNLSKSK WKCENKAGKS IDLGSTGMES 420 SRVANTKRMR DSQNQNFPEL KATMRSPKRV IIKASCEGKE VVEEGSSFSP KSLFAIPHGV 480 GGLHLLDSLN FVGESSEDLL LEVPSNSSFP QAELLHPTLS YGAQFSTTSS SVHSPVTHP

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MGKQGPCYHC GVASTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAENVDCEDQ  60
KVSRVKSISL NKNKEVKLVK RKQNCDNAAS GGFVPDYNQG YRKVVDEDTS NRSSSGSAVS  120
NSESCAQFGG TDASDLTGPA QSVVWDATVP SKKRTCAGRP KASSVEKLTR DLCTILHEQQ  180
SYFSASSEED LLFESDTPMV SVEIGHGSIL IRHPSSIARD EESEASSLSV DNKQCLLNEA  240
YSCSGTIPVH SDRSGMNFSF HGVEKSRNSA GQIMQQEQLG RHVFPNQDKS QLEKLQTSGN  300
HDSLLCLIDL NDVVNYEEFM RNLTPEEQQQ LLKYLPVVDT AKFPDSLKNM FNSFQFKENL  360
TYFQQLLAEG VFDVSMLGEE PEEWKTTLES LVLSNLSKSK WKCENKAGKS IDLGSTGMES  420
SRVANTKRMR DSQNQNFPEL KATMRSPKRV IIKASCEGKE VVEEGSSFSP KSLFAIPHGV  480
GGLHLLDSLN FVGESSEDLL LEVPSNSSFP QAELLHPTLS YGAQFSTTSS SVHSPVTHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-139	GATA family protein