PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX88550.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 175aa MW: 20039.8 Da PI: 8.6876

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX88550.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.3	7.1e-20	23	76	4	57
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++t++q+ +Le++F++n+++ e++ +LA++lg++ rqV +W+qN+Ra++k+ RDX88550.1 23 KKRLTEDQVAILEKCFASNMKLEPEQKFHLANQLGVPPRQVAIWYQNKRARWKN 76 5679************************************************95 PP
2	HD-ZIP_I/II	111.7	4.8e-36	22	113	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+rl+++qv++LE++F ++ kLepe+K +la++Lg+ prqva+W+qn+RAR+k++ lE+d+ +L+++++++++e+++Lek+ve+L++elk+ RDX88550.1 22 NKKRLTEDQVAILEKCFASNMKLEPEQKFHLANQLGVPPRQVAIWYQNKRARWKNQSLEVDHGVLQAKLENVMAEKKQLEKDVERLKAELKK 113 79*************9999******************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MGDFIFSFKT QEHAHQRAKH NNKKRLTEDQ VAILEKCFAS NMKLEPEQKF HLANQLGVPP 60 RQVAIWYQNK RARWKNQSLE VDHGVLQAKL ENVMAEKKQL EKDVERLKAE LKKAQEMLLI 120 AGNVKGADHK GGNSGVLDDA THHECWQSGE VMQVEELYAY FMGANYGSGL HEKRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53980.1	2e-39	HD-ZIP family protein