PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX88335.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 360aa MW: 39925.9 Da PI: 7.0487

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX88335.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.7	5.7e-10	168	215	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq RDX88335.1 168 SHSLAERVRREKISERMKYLQDLVPGC----NKIAGKAGMLDEIINYVQSLQ 215 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MLHCLNSSGN LGGTCSDMTL MERPVKWQLE NHHHQPDLNV FSSSSSHNLP QTLMTCADSA 60 LGEVLAHSLK PDPALWPQLD PPFGSSSALP TKKRKSPNSK VLADTDNRDK RVKVTAEEGE 120 SKVTDQPTNK NSKSNRETSA DTSKGSEVQN QKPEYIHVRA RRGQATDSHS LAERVRREKI 180 SERMKYLQDL VPGCNKIAGK AGMLDEIINY VQSLQRQVEF LSMKLAAVNP RLDFNIEELF 240 AKEVFPSCAQ GFPNMGMASD MNNNHAYLQF NSAQQLGGLI NNMGISPPNM GLRRNISTSP 300 VPLHETFLDS SCFTQILPSS NWEGDFQSLY NVAFDQGRTP SFPSQPFTGL VEASNLKMEM

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MLHCLNSSGN LGGTCSDMTL MERPVKWQLE NHHHQPDLNV FSSSSSHNLP QTLMTCADSA  60
LGEVLAHSLK PDPALWPQLD PPFGSSSALP TKKRKSPNSK VLADTDNRDK RVKVTAEEGE  120
SKVTDQPTNK NSKSNRETSA DTSKGSEVQN QKPEYIHVRA RRGQATDSHS LAERVRREKI  180
SERMKYLQDL VPGCNKIAGK AGMLDEIINY VQSLQRQVEF LSMKLAAVNP RLDFNIEELF  240
AKEVFPSCAQ GFPNMGMASD MNNNHAYLQF NSAQQLGGLI NNMGISPPNM GLRRNISTSP  300
VPLHETFLDS SCFTQILPSS NWEGDFQSLY NVAFDQGRTP SFPSQPFTGL VEASNLKMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	1e-57	bHLH family protein