PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX87899.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HD-ZIP
Protein Properties Length: 754aa    MW: 82940.6 Da    PI: 6.2124
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX87899.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.57.2e-2161116156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++ +++t++q++eLe++F+++++p++++r +L+k+l+L+ +qVk+WFqNrR+++k
  RDX87899.1  61 KKRYHRHTPHQIQELEAFFKECPHPDEKQRLDLSKRLSLENKQVKFWFQNRRTQMK 116
                 688999***********************************************999 PP
2START181.54.6e-572714942206
                 HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECT CS
       START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetleviss 87 
                 la++a++el+k+ +ae+p+W ks     e+ n +e+ + +++  +     + +ea r++g+v+ ++  lve+l+d + +W e+++    +a  l+vis+
  RDX87899.1 271 LALAAMEELLKMTQAESPLWIKSLdgekEMFNHEEYARLLSPCIGpkptaYVTEATRETGIVIINSLALVETLMDAN-RWAEMFPsmiaRAVNLDVISN 368
                 6899********************9988888999999999998889*******************************.*******99999999****** PP

                 T......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHH CS
       START  88 g......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphw 179
                 g      galq+m ae q+lsplvp R + f+R+++q+ +g+w++vdvS++   +  + ++++ +++lpSg+++++++ng+skvtw+eh++++++++h+
  RDX87899.1 369 GmggtrnGALQVMHAEVQLLSPLVPvRQVRFLRFCKQHAEGVWAVVDVSIEIGHDAANAHPFMSCRRLPSGCIVQDMPNGYSKVTWLEHWEYDESVVHQ 467
                 ****************************************************999999***************************************** PP

                 HHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 180 llrslvksglaegaktwvatlqrqcek 206
                 l+r+l++sg+ +ga +w atlqrqce+
  RDX87899.1 468 LYRPLLNSGVGFGAHRWIATLQRQCEC 494
                 *************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 754 aa     Download sequence    
MTGVQRKMEG PSEMGLIGEN FDAGLMGRMR DDEYESRSGS DNFEGVSGDD QDGGDDQPQR  60
KKRYHRHTPH QIQELEAFFK ECPHPDEKQR LDLSKRLSLE NKQVKFWFQN RRTQMKTQLE  120
RHENIMLRQE NDKLRAENSL MKDAMSNPVC NNCGGPAIPG QISFEEHQIR IENARLKDEL  180
NRICALANKF LGKPISSLTN PMALPTSNSG LELGIGRNGI GGSSTLGTSL PMGLDLGDGV  240
LGTQPAMPGI RPPLGLMGNE VQFERSMLID LALAAMEELL KMTQAESPLW IKSLDGEKEM  300
FNHEEYARLL SPCIGPKPTA YVTEATRETG IVIINSLALV ETLMDANRWA EMFPSMIARA  360
VNLDVISNGM GGTRNGALQV MHAEVQLLSP LVPVRQVRFL RFCKQHAEGV WAVVDVSIEI  420
GHDAANAHPF MSCRRLPSGC IVQDMPNGYS KVTWLEHWEY DESVVHQLYR PLLNSGVGFG  480
AHRWIATLQR QCECLAILMS SSISSDDHTA LSQAGRRSML KLAQRMTSNF CSGVCASSAR  540
KWDSLHIGTL GDDMKVMTRK NVDDPGEPPG IVLSAATSVW MPVSRQRLFD FLRDERLRSE  600
WDILSNGGPM QEMVHIAKGQ GHGNCVSLLR ANAVNANDNS MLILQETWMD ASCSVVVYAP  660
VDVQSLNVVM SGGDSAYVAL LPSGFAILPD GHNNSCNGTL QKGGDNSGGS LLTVGFQILV  720
NSLPTAKLTV ESVDTVNNLI SCTIQKIKAA LRVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein