PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX87752.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 207aa MW: 24353.6 Da PI: 7.1481 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.3 | 3e-19 | 52 | 106 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++t+eq+ Le+ F +++++ e++ +LA +lgL+ rqV vWFqNrR ++k+ RDX87752.1 52 KKRKLTAEQVSLLEQNFGNEHKLESERKDQLALELGLDPRQVAVWFQNRRCRWKN 106 56699************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 113.2 | 1.6e-36 | 52 | 142 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 kkr+l++eqv+lLE++F +e+kLe+erK +la eLgl+prqvavWFqnrR R+k+k+lE++y+ Lk+ +++ + e+++Le+ev +L+e+l RDX87752.1 52 KKRKLTAEQVSLLEQNFGNEHKLESERKDQLALELGLDPRQVAVWFQNRRCRWKNKKLEEEYSNLKNVHETTMLEKCHLEAEVLKLEEQLL 142 9**************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MNHRPIIEDH MMLFSRLYPG AITQVTPQQG ENKPRRRRNK KNKGGENGAV TKKRKLTAEQ 60 VSLLEQNFGN EHKLESERKD QLALELGLDP RQVAVWFQNR RCRWKNKKLE EEYSNLKNVH 120 ETTMLEKCHL EAEVLKLEEQ LLEAKKEIQR LLERGERAPS NSSSSSMEVV NPPFLGEFKV 180 EEYDDSDVFY VPETHYINGM EWINLYI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 35 | 55 | RRRRNKKNKGGENGAVTKKRK |
2 | 36 | 56 | RRRRNKKNKGGENGAVTKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 2e-52 | HD-ZIP family protein |