PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX87552.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 382aa MW: 42635.3 Da PI: 9.2407

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX87552.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.8	4.3e-06	57	79	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H RDX87552.1 57 YVCEICNQGFQRDQNLQMHRRRH 79 9*********************9 PP
2	zf-C2H2	15.4	5.5e-05	134	156	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C C+k + +s++k H++t+ RDX87552.1 134 WVCDRCSKAYAVQSDYKAHLKTC 156 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MLVNNSSPSS VPTSDPFSCA ENATTTNKRK RRPAGTPDPD AEVVSLSPKT LLESDRYVCE 60 ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET PVVKKRVFVC PEPTCLHHDP CHALGDLVGI 120 KKHFRRKHSN HKQWVCDRCS KAYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD 180 ACNMGRLGPE TQAAACLSRT ASSPSSDTNF STGGGPWPAA GVIIPKPSSV TDQPTNPTTA 240 ETNKQQYPNL ELQLSTATSI AASKNDVEDK AREQLRLAMA EKAFAEEARK QAKRQIQVAE 300 LEFNNAKRIR QQALAELDKA YALKDHAIKQ INSTMLQITC LACKHHFQSP TTAPPDDNSL 360 FFTYITTEPS QVQKHRAKPI HS

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MLVNNSSPSS VPTSDPFSCA ENATTTNKRK RRPAGTPDPD AEVVSLSPKT LLESDRYVCE  60
ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET PVVKKRVFVC PEPTCLHHDP CHALGDLVGI  120
KKHFRRKHSN HKQWVCDRCS KAYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD  180
ACNMGRLGPE TQAAACLSRT ASSPSSDTNF STGGGPWPAA GVIIPKPSSV TDQPTNPTTA  240
ETNKQQYPNL ELQLSTATSI AASKNDVEDK AREQLRLAMA EKAFAEEARK QAKRQIQVAE  300
LEFNNAKRIR QQALAELDKA YALKDHAIKQ INSTMLQITC LACKHHFQSP TTAPPDDNSL  360
FFTYITTEPS QVQKHRAKPI HS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	28	33	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-146	C2H2 family protein