PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX87105.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

ARF

Protein Properties

Length: 666aa MW: 74391.6 Da PI: 6.5461

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX87105.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.3	6.2e-23	117	217	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+kvlt sd++++g +++ +k+a+e+ ++++++ +l +d++g +W++k+i+r++++r++lt+GW+ Fv ++++ +gD++vF + +++el RDX87105.1 117 FCKVLTASDTSTHGGFSVLRKHATEClpaldmsQSIPTQ--ELAAKDLQGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRVVAGDTFVFL--RGDNGEL 211 99**************************976555555..8********************************************..3489999 PP EEEEE- CS B3 93 vvkvfr 98 +v+v+r RDX87105.1 212 RVGVRR 217 *997 PP
2	Auxin_resp	97.5	2e-32	243	324	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsse..rrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F v+Y+Pr+ s+F+v+v+k+++a+++k+ vGmRfkm+fe++ds+e +r+sGt+vgv+d++p +W +SkWrsLk RDX87105.1 243 ASHAVATQTLFVVYYKPRT--SQFIVSVNKYLEAINQKCNVGMRFKMRFEGDDSPEtdKRFSGTIVGVEDISP-HWVDSKWRSLK 324 789*************6..9****************************9833567******99.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 666 aa Download sequence
MSLNRGGEDD QLYEPLWKAC AGPHVEVPRA GQRVFYFPQG HMEQLEVSTN QELNQRIPLF 60 KLPSKILCRV VNVHLLAEQE TDEVYAQITL VPESKQNEPT SPDPCPAELP RPRVHSFCKV 120 LTASDTSTHG GFSVLRKHAT ECLPALDMSQ SIPTQELAAK DLQGYEWRFK HIFRGQPRRH 180 LLTTGWSTFV TSKRVVAGDT FVFLRGDNGE LRVGVRRFAP VQSSMPSSVI SSQSMHLGVL 240 ATASHAVATQ TLFVVYYKPR TSQFIVSVNK YLEAINQKCN VGMRFKMRFE GDDSPETDKR 300 FSGTIVGVED ISPHWVDSKW RSLKVQWDEL ASFPRPDRVS PWEIEPILAS VPTSLSQPAV 360 VKNKRPRPPS EVSDLGDTPL AASTFWDAGM TQSDMTQLSV IAESKRSDSS THMWHHNSKS 420 SSNGISMNQK EASWLSSPHS SGPSHLYHDT TDDSKSISAW PISKAHSERL NNDHLLDQVD 480 KEINKLEAAT SCRLFGIELI DHARNNNNTL SVENASMKAT NASGVTSEHE SDTSKASKEW 540 KQGQLQVSPK ETQSKQVCGR SCTKGVAVGR AVDLTTLDGY DQLVDELEKM FDIKGQLQHR 600 NRWEIVFTDD EGDMMLVGDD PWPEFCNMVR RIFICSSQDV HKLSSGSKLP ISSIEETIIS 660 SNTAET

Sequence ? help Back to Top

Protein Sequence Length: 666 aa Download sequence

MSLNRGGEDD QLYEPLWKAC AGPHVEVPRA GQRVFYFPQG HMEQLEVSTN QELNQRIPLF  60
KLPSKILCRV VNVHLLAEQE TDEVYAQITL VPESKQNEPT SPDPCPAELP RPRVHSFCKV  120
LTASDTSTHG GFSVLRKHAT ECLPALDMSQ SIPTQELAAK DLQGYEWRFK HIFRGQPRRH  180
LLTTGWSTFV TSKRVVAGDT FVFLRGDNGE LRVGVRRFAP VQSSMPSSVI SSQSMHLGVL  240
ATASHAVATQ TLFVVYYKPR TSQFIVSVNK YLEAINQKCN VGMRFKMRFE GDDSPETDKR  300
FSGTIVGVED ISPHWVDSKW RSLKVQWDEL ASFPRPDRVS PWEIEPILAS VPTSLSQPAV  360
VKNKRPRPPS EVSDLGDTPL AASTFWDAGM TQSDMTQLSV IAESKRSDSS THMWHHNSKS  420
SSNGISMNQK EASWLSSPHS SGPSHLYHDT TDDSKSISAW PISKAHSERL NNDHLLDQVD  480
KEINKLEAAT SCRLFGIELI DHARNNNNTL SVENASMKAT NASGVTSEHE SDTSKASKEW  540
KQGQLQVSPK ETQSKQVCGR SCTKGVAVGR AVDLTTLDGY DQLVDELEKM FDIKGQLQHR  600
NRWEIVFTDD EGDMMLVGDD PWPEFCNMVR RIFICSSQDV HKLSSGSKLP ISSIEETIIS  660
SNTAET

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	364	368	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.2	0.0	ARF family protein