PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX85784.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 326aa MW: 36368.1 Da PI: 8.2209

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX85784.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.2e-05	168	185	3	20
ETTTTEEESSHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHi 20 C+ C+ksF+r nL+ H+ RDX85784.1 168 CSVCSKSFNRYNNLQMHM 185 *****************9 PP
2	zf-C2H2	14.3	0.00012	250	272	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C +C+k F k + ++H +++ RDX85784.1 250 YMCRKCDKAFAVKGDWRTHEKNC 272 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MTDPQSNLYG GTFNFMPLYS HHSSFTSQSN LFSPYPLAHS NNNTFSIQSE APPSPPLREA 60 LPLINNIKQK ENEPSNCGEG QKRDKDESLL TSTEDGDGGD ETVTVALRIG LPSVAASDLL 120 GSRKISACGE KGEVRTVISG HPLDRINKVQ YWIPTPSQIL IGPTQFLCSV CSKSFNRYNN 180 LQMHMWGHGS QYRKGPDSLK GTQPSAMLRL PCFCCAPGCK HNIDHPRARP LKDFRTLQTH 240 YKRKHGIKPY MCRKCDKAFA VKGDWRTHEK NCGKIWYCLC GSDFKHKRSL KDHIKAFGHG 300 HGAIDIDCMQ EDEGGSEIEH DGDSSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-113	C2H2 family protein