PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX85638.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family ARF
Protein Properties Length: 709aa    MW: 78919.1 Da    PI: 6.4716
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX85638.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.41.3e-23128228198
                 EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 f+kvlt sd++++g +++ +k+a+e+     +++++ +++l+ +d+++ +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF +    ++el+v
  RDX85638.1 128 FCKVLTASDTSTHGGFSVLRKHATEClpaldMSQPTPTQELVAKDLHSYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--GGNGELRV 224
                 99****************************977777888*************************************************4..378899** PP

                 EEE- CS
          B3  95 kvfr 98 
                 +v+r
  RDX85638.1 225 GVRR 228
                 **98 PP
2Auxin_resp94.22e-31254335183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsse..rrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha++t++ F v+Y+Pr+  s+F++ v+++++a+k+k+ vGmRfkm++e++ds+e  +r+sGt+vgv+d++p +W nS+WrsLk
  RDX85638.1 254 ASHAVATQTLFVVYYKPRT--SQFIIGVNQYLDAMKNKFNVGMRFKMRYEGDDSAEtdKRFSGTIVGVEDISP-HWVNSQWRSLK 335
                 789***************6..9********************************9833577**********99.*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 709 aa     Download sequence    
MLNRASNVSA EAVVGSGESG DELYEQLWKA CAGPLVDVPR VGQRVFYFPQ GHMEQLEAST  60
NQELNQRIPL LKLPTKILCG VVNVHLLAEQ ETDEVYAQIT LVPESNQDEP TSTDPCTPEP  120
PRAPVHSFCK VLTASDTSTH GGFSVLRKHA TECLPALDMS QPTPTQELVA KDLHSYEWRF  180
KHIFRGQPRR HLLTTGWSTF VTSKRLVAGD TFVFLRGGNG ELRVGVRRLA RQASSMPSSV  240
ISSQSMHLGV LATASHAVAT QTLFVVYYKP RTSQFIIGVN QYLDAMKNKF NVGMRFKMRY  300
EGDDSAETDK RFSGTIVGVE DISPHWVNSQ WRSLKVQWDE HTAVPRPDRV SPWEIEPFVA  360
SASTPSVQPT IVKTKRPRPP SEIPDVDTAS AASVFWDAGL PQADMTQINV LAESKRNDNT  420
GTWHHMQTDM NSKNNSSTTM LRNQTEGSWL SSPHSSCPSH LFQDTTDDSK GVSVWPVSMS  480
HSSRLNNDHV LDQVDKESKV EAATSYRLFG IELIDHSRNS PAVEKASAHP VNVPKVTTEG  540
CASTLSLTDA GYKSDVPKDL SKEKKQEQQQ VSPKETQSKQ ICRSVIRIFS NTSLLLMFKT  600
CQKVQMQGVA VGRAVDLTML DGYDQLINEL EEMFDIKGQL QHRNMWEIVF TDDEGDMMLV  660
GDDPWPEFCN MARRIFICSS QDVKKMSSGS KLPISSVEDG TKCNGPLCQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1375379KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23980.10.0ARF family protein