PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX85503.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 775aa MW: 83567.9 Da PI: 8.9867

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX85503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.5	5.1e-05	91	113	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H RDX85503.1 91 FICEICNKGFQRDQNLQLHRRGH 113 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 775 aa Download sequence
MSNITSCDSG SFSTENTRED AAVKQQPEML GQFHSPHSHT STTTTNNSNG SNTNSQPPAP 60 VKKKRSLPGN PDPSAEVIAL SPTTLMATNR FICEICNKGF QRDQNLQLHR RGHNLPWKLK 120 QRTSTEVRKR VYVCPEPSCV HHNPARALGD LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS 180 DWKAHSKICG TREYKCDCGT IFSRRDSFIT HRAFCDALAE ENNKGNEGQL PKIGPNMQCQ 240 AIPNLVSSLP INIVPTPQIG GTSEFNHSEH KHPLSLPHEL MPMPAPKPFT SNNVNMAGTV 300 FTRSLSSTTS PSLQLSSNMF EENGLHLAAG SPHMSATALL QKAAQMGATV NEKSFSTSMA 360 PPSFGVLQQQ PNGQSFMNQY MNGGQQDVNI STQYNSFGAN AMGGGSVGMN GVDMFNAILD 420 QSKALSKIIE QNSRGSSGGA TNGGSSGAVN VVGGSKGSGD VMTLDFLGIG GGSSGGGGGG 480 GAHGNFYGGV QQQGETGAPE EVWRNWSMQA RFGTWNPNPI RIAQCSGEQS PAEEFAPLAT 540 KFRRRLLVGV GSASVVAVGA NFGGITSFLL GLSPQSGRNL KLDVLYPIGG YSRCFDTKEG 600 FEFIYPANWV GDQTVLYRAA KKREMERSLD PPPLNVRRRS NINEPVVAFG PPGSTGELNV 660 SVIVSPVASD FSIEAFGGPD EVGEAVIRSI TGSGQRPDVK GTLVKSSLRE DSIRNAKYYE 720 LEFRVESPLF KRHNVSVCCA RGGRLFTLNA QAPESEWPVL KSDFYRIANS FSLTT

Sequence ? help Back to Top

Protein Sequence Length: 775 aa Download sequence

MSNITSCDSG SFSTENTRED AAVKQQPEML GQFHSPHSHT STTTTNNSNG SNTNSQPPAP  60
VKKKRSLPGN PDPSAEVIAL SPTTLMATNR FICEICNKGF QRDQNLQLHR RGHNLPWKLK  120
QRTSTEVRKR VYVCPEPSCV HHNPARALGD LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS  180
DWKAHSKICG TREYKCDCGT IFSRRDSFIT HRAFCDALAE ENNKGNEGQL PKIGPNMQCQ  240
AIPNLVSSLP INIVPTPQIG GTSEFNHSEH KHPLSLPHEL MPMPAPKPFT SNNVNMAGTV  300
FTRSLSSTTS PSLQLSSNMF EENGLHLAAG SPHMSATALL QKAAQMGATV NEKSFSTSMA  360
PPSFGVLQQQ PNGQSFMNQY MNGGQQDVNI STQYNSFGAN AMGGGSVGMN GVDMFNAILD  420
QSKALSKIIE QNSRGSSGGA TNGGSSGAVN VVGGSKGSGD VMTLDFLGIG GGSSGGGGGG  480
GAHGNFYGGV QQQGETGAPE EVWRNWSMQA RFGTWNPNPI RIAQCSGEQS PAEEFAPLAT  540
KFRRRLLVGV GSASVVAVGA NFGGITSFLL GLSPQSGRNL KLDVLYPIGG YSRCFDTKEG  600
FEFIYPANWV GDQTVLYRAA KKREMERSLD PPPLNVRRRS NINEPVVAFG PPGSTGELNV  660
SVIVSPVASD FSIEAFGGPD EVGEAVIRSI TGSGQRPDVK GTLVKSSLRE DSIRNAKYYE  720
LEFRVESPLF KRHNVSVCCA RGGRLFTLNA QAPESEWPVL KSDFYRIANS FSLTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-103	C2H2 family protein