PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX83010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ZF-HD | ||||||||
Protein Properties | Length: 141aa MW: 16408.6 Da PI: 8.5125 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 52.2 | 1.5e-16 | 1 | 41 | 16 | 56 |
ZF-HD_dimer 16 slGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56 slG +a+DGC Ef++ + +++ + l CaAC+CHR+FHR+ RDX83010.1 1 SLGLTAFDGCHEFLQGRLDQNGHDNLLCAACDCHRSFHRQF 41 57999***********9888999****************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence |
SLGLTAFDGC HEFLQGRLDQ NGHDNLLCAA CDCHRSFHRQ FIPYSFMPQT QTKNAVNVRE 60 PEEESKPKSM KRTIFTPEQR TQMTAFAEKV VWKPLKHDKD QVERFCSEMG INRKMFLVWL 120 NNNRHQAMQN ATAPQPDPRT T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65410.1 | 3e-21 | ZF-HD family protein |