PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX82575.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 500aa MW: 55176.7 Da PI: 7.7697

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX82575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.2	0.0011	180	202	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + RDX82575.1 180 WKCDKCSKKYAVQSDWKAHSKIC 202 58*****************9876 PP
2	zf-C2H2	11.2	0.0011	210	228	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg+ Fsrk+++++H + RDX82575.1 210 DCGTIFSRKDSFVTHRAFC 228 9**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
RLCVSIVCFK QSFRASTIFG IRKVACLGHS NLNSSVSSMM SEDAISVPSN LRGSLVHVHE 60 PNPNPNPNSN SSVKRKRSLP GNPGKSKSEF RSDCSVAKVT DGDEPIHMRS VQQGFSERPE 120 PAAASARAQP AVEAAAENKG RGGEEEGVQK TCVHHDPCRA LGDLTGIKKH FSRKHGEKKW 180 KCDKCSKKYA VQSDWKAHSK ICGTRQYKCD CGTIFSRKDS FVTHRAFCDA MAEQSARLPG 240 VLSSLGNGIL MNAAQAPRVL PQSLQLHGFH SEFGGPGPEQ YMGNFVDAEH GHEHEHEHEQ 300 EHKLKLPLWL DQANPQLNNP LSVFSQGTTL GEANNMFGTS SSQWVNYHRY PETSFTSANI 360 SMSHVLKLEQ EENKGDLSHS VSSLYPQGCL SHHMESTRIS GNSSFDNSNC VFGLLDPNMS 420 TTSSNNRSNA VDIQKILKQA NNHGEILNHM VMPRIQEWET GQAEIIMEKQ RSNTEDHLTK 480 DFMGVGPAAM NLQSQFSGHY

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

RLCVSIVCFK QSFRASTIFG IRKVACLGHS NLNSSVSSMM SEDAISVPSN LRGSLVHVHE  60
PNPNPNPNSN SSVKRKRSLP GNPGKSKSEF RSDCSVAKVT DGDEPIHMRS VQQGFSERPE  120
PAAASARAQP AVEAAAENKG RGGEEEGVQK TCVHHDPCRA LGDLTGIKKH FSRKHGEKKW  180
KCDKCSKKYA VQSDWKAHSK ICGTRQYKCD CGTIFSRKDS FVTHRAFCDA MAEQSARLPG  240
VLSSLGNGIL MNAAQAPRVL PQSLQLHGFH SEFGGPGPEQ YMGNFVDAEH GHEHEHEHEQ  300
EHKLKLPLWL DQANPQLNNP LSVFSQGTTL GEANNMFGTS SSQWVNYHRY PETSFTSANI  360
SMSHVLKLEQ EENKGDLSHS VSSLYPQGCL SHHMESTRIS GNSSFDNSNC VFGLLDPNMS  420
TTSSNNRSNA VDIQKILKQA NNHGEILNHM VMPRIQEWET GQAEIIMEKQ RSNTEDHLTK  480
DFMGVGPAAM NLQSQFSGHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	6e-44	C2H2 family protein