PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX81840.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

ARF

Protein Properties

Length: 1168aa MW: 130612 Da PI: 6.51

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX81840.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	64.6	1.5e-20	137	252	1	99
EEEE-..-HHHHTT-EE--HHH.HTT....................---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....................ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDf 79 f+k+lt sd++++g +++p++ ae++ +++++ ++l+ +d++ ++W +++iyr++++r++lt+GW+ Fv+ ++L +gD+ RDX81840.1 137 FCKTLTASDTSTHGGFSVPRRAAEKIfppllelesrgihadhkcdySMQPPA-QELVAKDLHDNTWAFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDS 234 99*******************************99999999999444444.48**************************************** PP EEEEE-SSSEE..EEEEE-S CS B3 80 vvFkldgrsefelvvkvfrk 99 v+F ++++++l++++ r+ RDX81840.1 235 VLFI--RDEKQHLLLGIKRA 252 **..55788889988775 PP
2	Auxin_resp	121.6	5.7e-40	277	359	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaas++s+F+++YnPras++eFvv+++k++ka++++vs+GmRf+m+fete+s rr++Gt++g+sdldpvrW+ S+Wr+++ RDX81840.1 277 AAHAASNNSPFTIFYNPRASPAEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKSSQWRNIQ 359 79******************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1168 aa Download sequence
MTFHINIILV LMKAPSNAYL PNSGEGERKT INSELWHACA GPLVSLPPVG SLVVYFPQGH 60 SEQVAASMQK ETDFIPSYPN LPSKLICMLH NVALHADPET DEVYAQMTLQ PVNKYEKEAI 120 LASDMGLKQS RQPTEFFCKT LTASDTSTHG GFSVPRRAAE KIFPPLLELE SRGIHADHKC 180 DYSMQPPAQE LVAKDLHDNT WAFRHIYRGQ PKRHLLTTGW SVFVSTKRLF AGDSVLFIRD 240 EKQHLLLGIK RANRQQPALS SSVISSDSMH IGILAAAAHA ASNNSPFTIF YNPRASPAEF 300 VVPLAKYNKA MYTQVSLGMR FRMMFETEES GVRRYMGTIT GISDLDPVRW KSSQWRNIQV 360 GWDESTAGER PSRVSIWEIE PVVTPFYICP PPFFRSKFPR QPGMPDDESD IENAFKRAMP 420 WIGDDYGMKD ASSSIFPGLS LVQWMSMQQN NQLSAAQSGC FPSMLPSNTL QGNLGTDDPS 480 KLLNFQSPVL SAPSLQLNKP NLPNQINQLQ QSPVSWPQQQ QQLQQQQQQQ LQQQQQHQQL 540 QQQQQQQQQQ LQSLLQIPMN QLQPQRQQQL PEPQNLPLLQ QLPQKQQQSN QHATIMNNGV 600 VASNQITNQF VQQPMSYGQL QQQQLLSGGI PPQQGIQPAS KNTFPLTSLP QDSQFQQQID 660 QQANLLQRQQ QQQQQQTQLQ QSPLQLLQQN MPQRAPQQPP ATQMLQQNPS EQQLHLQLLQ 720 KLQQQQQQQQ LLSTSTPLLQ SQLLQQQNTH QQNQQLPQPL PPISQHQPQQ FGNNAFSTDK 780 LLNSNNFSSS SLMQSQQLPM NQPQNTQKSL TITRAPSTLT DGDAPSCSTS PSTNNCQVSP 840 PNLLKRNQQL PATLGGSLIV EPTSNLIQEL HSKPDLQIKH ELFNVKGPDQ LKYKGTITDQ 900 LEASSSGTSY CLDPGNVQQN LPLSNFCIEG DVQSHPRNTL QFDSNLDGLT PDTMLLRGYD 960 SPKDLQNLLS NYGGAPRDIE TELSTADISS QSFGVPNMPF KPGCSGDVGI NDTAVLNNNN 1020 GLRANQTPRM RTYTKVQKRG SVGRCIDVTR YKGYDELRHD LARMFGIEGQ LEDPLRTDWK 1080 LVYVDHENDI LLVGDDPWDE FVSCVQSIKI LSSAEVQQMS LDGDLGGNVP IPNQACSGTD 1140 SGNAWRGQYE DNSAASFNRY SRVGAASV

Sequence ? help Back to Top

Protein Sequence Length: 1168 aa Download sequence

MTFHINIILV LMKAPSNAYL PNSGEGERKT INSELWHACA GPLVSLPPVG SLVVYFPQGH  60
SEQVAASMQK ETDFIPSYPN LPSKLICMLH NVALHADPET DEVYAQMTLQ PVNKYEKEAI  120
LASDMGLKQS RQPTEFFCKT LTASDTSTHG GFSVPRRAAE KIFPPLLELE SRGIHADHKC  180
DYSMQPPAQE LVAKDLHDNT WAFRHIYRGQ PKRHLLTTGW SVFVSTKRLF AGDSVLFIRD  240
EKQHLLLGIK RANRQQPALS SSVISSDSMH IGILAAAAHA ASNNSPFTIF YNPRASPAEF  300
VVPLAKYNKA MYTQVSLGMR FRMMFETEES GVRRYMGTIT GISDLDPVRW KSSQWRNIQV  360
GWDESTAGER PSRVSIWEIE PVVTPFYICP PPFFRSKFPR QPGMPDDESD IENAFKRAMP  420
WIGDDYGMKD ASSSIFPGLS LVQWMSMQQN NQLSAAQSGC FPSMLPSNTL QGNLGTDDPS  480
KLLNFQSPVL SAPSLQLNKP NLPNQINQLQ QSPVSWPQQQ QQLQQQQQQQ LQQQQQHQQL  540
QQQQQQQQQQ LQSLLQIPMN QLQPQRQQQL PEPQNLPLLQ QLPQKQQQSN QHATIMNNGV  600
VASNQITNQF VQQPMSYGQL QQQQLLSGGI PPQQGIQPAS KNTFPLTSLP QDSQFQQQID  660
QQANLLQRQQ QQQQQQTQLQ QSPLQLLQQN MPQRAPQQPP ATQMLQQNPS EQQLHLQLLQ  720
KLQQQQQQQQ LLSTSTPLLQ SQLLQQQNTH QQNQQLPQPL PPISQHQPQQ FGNNAFSTDK  780
LLNSNNFSSS SLMQSQQLPM NQPQNTQKSL TITRAPSTLT DGDAPSCSTS PSTNNCQVSP  840
PNLLKRNQQL PATLGGSLIV EPTSNLIQEL HSKPDLQIKH ELFNVKGPDQ LKYKGTITDQ  900
LEASSSGTSY CLDPGNVQQN LPLSNFCIEG DVQSHPRNTL QFDSNLDGLT PDTMLLRGYD  960
SPKDLQNLLS NYGGAPRDIE TELSTADISS QSFGVPNMPF KPGCSGDVGI NDTAVLNNNN  1020
GLRANQTPRM RTYTKVQKRG SVGRCIDVTR YKGYDELRHD LARMFGIEGQ LEDPLRTDWK  1080
LVYVDHENDI LLVGDDPWDE FVSCVQSIKI LSSAEVQQMS LDGDLGGNVP IPNQACSGTD  1140
SGNAWRGQYE DNSAASFNRY SRVGAASV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein