PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX80841.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | C2H2 | ||||||||
Protein Properties | Length: 238aa MW: 26918.1 Da PI: 8.4455 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.3 | 0.00025 | 45 | 65 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k Fs+ L H++ H RDX80841.1 45 CKYCNKKFSNYQALGGHQNAH 65 *****************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MKQEETSKFE SNIGEESNVE AERNQEKVSV KGSNKAALRK KELFCKYCNK KFSNYQALGG 60 HQNAHKAERA AAQKEKILSM ASAYNTNSFV DGFGNSNQAY RRLGVSPLSM TRFKSHYSWS 120 RMRLKHDNYY HVQPTIHQLQ TLMGKESGLG FHQHYKLYQP LSFPMHREGA PNSESKTPVL 180 LNLFPDEDSF GLTSNSFITN QDLNVKTSCD SENFIEADTL SSTSVSGVVE ELDLTLKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10970.1 | 3e-10 | C2H2 family protein |