PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX80746.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family ARF
Protein Properties Length: 608aa    MW: 66676.6 Da    PI: 7.5871
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX80746.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.45.6e-23121222199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f k+lt+sd+++ g +++p+ +ae++        +++ +  t++ +d +g  W++++iyr++++r++lt+GW++Fv++++L +gD++vF   + +++ l
  RDX80746.1 121 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TIIAKDMHGMCWKFRHIYRGTPRRHLLTTGWSNFVNQKRLVAGDSIVFL--RAENGDL 215
                 89****************************986445444..8************************************************..4488999 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +v+++r+
  RDX80746.1 216 CVGIRRA 222
                 ****997 PP

2Auxin_resp109.82.8e-36277359283
  Auxin_resp   2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                 ++ a ++ +FevvY+Pra+++eF+vk++ v++a++++++ GmRfkm fetedss++++ +Gt+++++ +dp+rWp+S+Wr+L+
  RDX80746.1 277 VTCAVNARPFEVVYYPRATSPEFCVKASLVKAAMQIQWCSGMRFKMPFETEDSSRISWfMGTISSLQVADPIRWPDSPWRLLQ 359
                 66778999*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 608 aa     Download sequence    
MFTVMDSMER GSERCLDSQL WHACAGAMVQ MPGLNTKLFY FPQGHAEHAH GKVDFGQARV  60
PVPAFIPCRL SGMKYMADPD TDEVYVKMRL TPLREHELDL EDGCFLGNTG VEGQEKPPTS  120
FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSAEPPVQT IIAKDMHGMC WKFRHIYRGT  180
PRRHLLTTGW SNFVNQKRLV AGDSIVFLRA ENGDLCVGIR RAKKGIGGGA EFSSGWNPLF  240
GGGSAFLCGT EGSLVSGAKG ADDMVGRVPA ESVLEAVTCA VNARPFEVVY YPRATSPEFC  300
VKASLVKAAM QIQWCSGMRF KMPFETEDSS RISWFMGTIS SLQVADPIRW PDSPWRLLQV  360
VWDEPDLLQN VKCVNPWLVE LVSNMPTFNL SAYSPPRKKQ RFIQDPYFQV INQLPMPSFS  420
SNVLNYTNSL CTIQDNNSSA GIQGARHAQF GLSPSDFPFN KLQADMLLGG FSRLDHAAQP  480
VRPPCGTYKN NTTTKANVDI SCLLTVGNPG QNFKESNERK APHILLFGKL ITTEQKSSNT  540
SSGSTTGNSV SEGNSLKTSK SNASDGLGCA LHQGSPIENN SDGGSPWYKD QHKSDLGTDK  600
VNTLCIAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.10.0ARF family protein