PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX79301.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | B3 | ||||||||
Protein Properties | Length: 466aa MW: 52864.7 Da PI: 10.0336 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 47.8 | 2.7e-15 | 21 | 105 | 10 | 99 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +l++g l +p+kf++ehg + s l l+ ++g +W+v+ +k +g+ ++++kGWkeF+ L++g ++Fk++++ l v++f++ RDX79301.1 21 TLQHGKLKIPNKFTREHGAN--LSNPLFLKLPDGIEWKVYW--TKDDGGgIWFQKGWKEFAAYYSLNQGHLLLFKYQETCH--LEVHIFDQ 105 567899***********977..6777***************..6666666*************************976444..59999987 PP | |||||||
2 | B3 | 55.7 | 8.9e-18 | 246 | 332 | 1 | 95 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f vl ps++ + +++p fa+++ ++k+++ ++ l++++gr+W + + r ++ ++kGWk Fv++n+L++gD+++F+l+++ + + v+ RDX79301.1 246 FMVVLQPSYAYGYS-MIIPTAFAKKYLKEKPRD-DILLRNLDGRTWLISF--RLGR----FRKGWKTFVSDNHLNAGDVCLFELTKSGGHCFQVS 332 66788888888887.***********5555565.9***************..7777....99*********************986544433555 PP | |||||||
3 | B3 | 40.4 | 5.2e-13 | 377 | 456 | 1 | 87 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 ff v ++++ ++ r ++p f+++h g+ k++++ + +sW v++ ++ r+ l+kGW +F+ + +L++gD+++F+l+++ RDX79301.1 377 FFRVIIKANCNRDFRPRVPVAFVRKHLGE----KQIVMLQFLKKSWHVNI---IGDVRTKLSKGWTKFAIESKLRQGDVCIFELIDK 456 7888899999999999**********555....25999999*********...4445668***********************9874 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 466 aa Download sequence |
MTCNHPLPSE ILFFKIILYT TLQHGKLKIP NKFTREHGAN LSNPLFLKLP DGIEWKVYWT 60 KDDGGGIWFQ KGWKEFAAYY SLNQGHLLLF KYQETCHLEV HIFDQSTLEI SYPSHPTQNE 120 NDNIDHISNK PVQVLDEVTS IQKTKLKSTI SCPKPQSQKT GSSGVVGQSS NLLQHVQIKG 180 EQSQFTNFAR SSDKEVTPSH KTKLKSIIPG PQPQDMGGAT ESQKVERLIS KATNRAATSE 240 SKGPSFMVVL QPSYAYGYSM IIPTAFAKKY LKEKPRDDIL LRNLDGRTWL ISFRLGRFRK 300 GWKTFVSDNH LNAGDVCLFE LTKSGGHCFQ VSFIRLSQET QSPGDGDPGR IPDSKCISAL 360 PIKAMQEARK FTSENPFFRV IIKANCNRDF RPRVPVAFVR KHLGEKQIVM LQFLKKSWHV 420 NIIGDVRTKL SKGWTKFAIE SKLRQGDVCI FELIDKANAL NKEFEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 1e-37 | B3 family protein |