PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX79261.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C3H

Protein Properties

Length: 293aa MW: 31022.2 Da PI: 9.2226

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX79261.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	25.3	2.7e-08	101	126	2	27
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 kt++C+ f Ck+Gd+C+FaHg+ RDX79261.1 101 KTRICNKFNSAEGCKFGDKCHFAHGE 126 89**********************96 PP
2	zf-CCCH	35.7	1.4e-11	262	286	1	26
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +kt+lC +fa+ G C +G+rC+FaHg RDX79261.1 262 FKTKLCENFAK-GSCTFGERCHFAHG 286 69*******.***********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MDTRKRGRPE PGFGFNSGFK KSKQEMESLS SGVGSKSKPC TKFFSTAGCP FGEGCHFLHY 60 VPGGYNAVAH MMNLTPAAPP ASRNVAALPP VPNGSTPPVV KTRICNKFNS AEGCKFGDKC 120 HFAHGEWELG KLFAPSFDDH RAMGPNSGGR HAGRMEPPPG PAASFGANAT AKISVEASLA 180 GAIIGKGGVN SKQICRQTGA KLSIREHESD PNLRNIELEG SFEQIKEASN MVKDLLLTLQ 240 MSAPPKSTPG VPGAPGPHGS NFKTKLCENF AKGSCTFGER CHFAHGAAEL HQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12130.1	3e-91	C3H family protein