PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX79031.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB_related | ||||||||
Protein Properties | Length: 91aa MW: 10649.9 Da PI: 8.8872 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.1 | 2e-08 | 16 | 61 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 r +WT +++ +a +++ + +W Ia+++g ++ k++k ++ RDX79031.1 16 RSSWTRLQNKQFEKALALYDEDtpnRWQNIAKEVG-DKSVKEVKRHY 61 789*****************99*************.**********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 91 aa Download sequence |
MASNSLKDNN SKEHFRSSWT RLQNKQFEKA LALYDEDTPN RWQNIAKEVG DKSVKEVKRH 60 YAILLEDLSS IESGRVPIPD YDKHLKYLSL N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.2 | 5e-31 | MYB_related family protein |