PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX78218.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | bHLH | ||||||||
Protein Properties | Length: 253aa MW: 28527.4 Da PI: 7.0028 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.7 | 1.8e-12 | 75 | 117 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++P+ + ++Ka+iL A+eY+k+L RDX78218.1 75 IVERRRRKKLNDRLYMLRSIVPNiS------EMDKASILGDAIEYLKEL 117 79*********************66......8***************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MVMKVLKGKQ VQHIRERSDS DCEKMKTCNV AQHRSFDGSR FNYDSDEIIE SGRNSENNSD 60 ANSTNKKGIP AKNLIVERRR RKKLNDRLYM LRSIVPNISE MDKASILGDA IEYLKELVQK 120 ISDLHNELES STPTDTSLLT LESSFLHPLT PTLSTLPALT QELCLNSLPS PNDQPARVEV 180 GFREGRGVKI HMFCDRKPGL LLSTMRALDN LGLDIHQQFQ WICYGYFPSS GQDVHPGHIE 240 AVLLDSAGFH SMT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 77 | 84 | ERRRRKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26744.1 | 1e-62 | bHLH family protein |