PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX78217.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family ARF
Protein Properties Length: 857aa    MW: 95206.6 Da    PI: 6.5935
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX78217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.45.5e-23159260199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f+k+lt sd++++g +++ +++a+e+      + k++ +++l+ +d++ ++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +++el+
  RDX78217.1 159 FCKTLTASDTSTHGGFSVLRRHADEClppldmS-KQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENGELR 254
                 99*****************************63.4445569************************************************..449999** PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                 v+v+r+
  RDX78217.1 255 VGVRRA 260
                 ***996 PP
2Auxin_resp118.65.1e-39285367183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha+ t+++F+v+Y+Pr+s++eF+v++++++++lk+++++GmRfkm+fe+e+++e+r++Gt+vg++d+dp rWp+SkWrsLk
  RDX78217.1 285 AWHAILTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWPESKWRSLK 367
                 79*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 857 aa     Download sequence    
MTTSEVSIKG NSVNGNGENN ACGYNNGNDV RNGAGEGQNA SSSSSARDAE AALYRELWHA  60
CAGPLVTVPR EGERVFYFPQ GHIEQVEAST NQVAEQHMPV YNLPPKILCR VINVMLKAEP  120
DTDEVFAQVT LLPEPNQDEN AVEKEAPPPP PPRFHVHSFC KTLTASDTST HGGFSVLRRH  180
ADECLPPLDM SKQPPTQELV AKDLHANEWR FRHIFRGQPR RHLLQSGWSV FVSSKRLVAG  240
DAFIFLRGEN GELRVGVRRA MRQQGNVPSS VISSHSMHLG VLATAWHAIL TGTMFTVYYK  300
PRTSPAEFIV PYDQYMESLK NNYTIGMRFK MRFEGEEAPE QRFTGTIVGI EDADPKRWPE  360
SKWRSLKVRW DETSNIPRPE RVSQWKIEPA LAPPAINPLP MPRPKRPRSN VVPSSPDSSV  420
LTREASSKVS VDPLPASGFQ RVLQGQELST LRGNFAESID SDTAEKSVVW PPAADDEKID  480
VVSTSRRYGS ESWMSMGRHE PTYPDLLSGF GAHGDQSSHT SFVDQIGPVA NLSRKHLLDR  540
EGKHNVPSSL WPVVPSSLSL NFLDSNTKGS AQGGDTTYQV RGNLRYSSAF GEYPVLHGHK  600
VEHSHGNFLM PPPPSTQYES PRSRELLPKP ISGKPCEVSK PKDSDCKLFG ISLLSSPIAL  660
EPSLSQRNVA SEPVGHMHMT SHQQRTFEND QKSEHSRGTK LADGLLNDDH EKLLQTSQSH  720
LKDVQPKSHS GSARSCTKVH KKGIALGRSV DLTKFSDYDE LIAELDQLFE FGGELTSPQK  780
DWLIVYTDNE GDMMLVGDDP WQEFVAMVRK IYIYPKEEIQ KMSPGTLSSK NEENQSTSEG  840
ADGQEIKCQL NHSASDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein