PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX78203.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | WRKY | ||||||||
Protein Properties | Length: 308aa MW: 34147.7 Da PI: 10.0844 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.5 | 2.1e-31 | 237 | 294 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+Cts gCp++k+ver+ +d +++++tYeg+Hnh+ RDX78203.1 237 DEYSWRKYGQKPIKGSPHPRGYYKCTSVrGCPARKHVERAVDDSNMLVVTYEGDHNHS 294 9*************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence |
MAVELMRNSV SDDGDAVAVK EAASAGIHSV EKLVKMISEQ SERSHPELEA VADVAVNRFR 60 EVISLLDRPR TGHARFRRAP TTVPPVPVIH LQQMVDDSKN KPQQHKQQTT SAFKVYCPPP 120 PLPQNQPFLL PRPDKNEATN SYVSTLTGDS DTLHRSCRSN SAFQISHVSL QGGNSFMRKP 180 PLSSNSVKRK CNSTGFPDVK CGSSSAKCHC SKKRKLRLKR VIRVPAISSK TADIPPDEYS 240 WRKYGQKPIK GSPHPRGYYK CTSVRGCPAR KHVERAVDDS NMLVVTYEGD HNHSHTPSEV 300 AHVVLESS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24240.1 | 2e-76 | WRKY family protein |