PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX77737.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | GATA | ||||||||
Protein Properties | Length: 341aa MW: 37887.9 Da PI: 4.729 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 47.7 | 2.1e-15 | 186 | 222 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg ++ Tp +Rrgp g+++LCnaCGl+++ kg+ RDX77737.1 186 CQHCGISEksTPAMRRGPAGPRSLCNACGLMWANKGT 222 *****99999************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MDRLNNRTDN GQEPPPQPLV PMQVDGFHYA NGSDEGEETL PLANASSALH ARTSELTISF 60 EGEVYVFPAV TPEKVQAVLL LLGGQEMPSS VPASDLLLQQ NCQDIREIND PSRSSKNSRR 120 IASLVRFREK RKERCFEKKI RYSCRKEVAQ RMHRKNGQFA SLKEDYKSPA ENWDSSNGTP 180 CPESTCQHCG ISEKSTPAMR RGPAGPRSLC NACGLMWANK GTLRDLSKAG RTAFEQNELP 240 STTEAEHACA NQDKEGSPEE TKPVQMDSKQ SPEKTNEQFI IGTAESVTDN LSIQVENHAL 300 SLHEQDTLED LADASGTEFE IPAGFDEQVD IDDSNLRTYW L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.1 | 3e-56 | GATA family protein |