PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX77688.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family ARF
Protein Properties Length: 931aa    MW: 103884 Da    PI: 6.8532
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX77688.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3733.8e-23142250199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE.....E-SS CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk.....ldgr 87 
                 f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F      ++++
  RDX77688.1 142 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIwqcifFNRN 238
                 99*****************************8544444..48***********************************************9666644444 PP

                 SEE..EEEEE-S CS
          B3  88 sefelvvkvfrk 99 
                 ++ +l+++++r+
  RDX77688.1 239 EKNQLLLGIRRA 250
                 777777777775 PP

2Auxin_resp1219.1e-40275358183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrW+nS+Wrs+k
  RDX77688.1 275 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWQNSHWRSVK 358
                 79*********************************9789******************************************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 931 aa     Download sequence    
MTTSEPRLLG SFFAPMRLSS AAFSPPHQEG ERRVLDSELW HACAGPLVSL PAVGSRVVYF  60
PQGHSEQVAV STNKEVDAHI PNYPSLPPQL MCQLHNMTMH ADVETDEVYA QMTLQPLNPQ  120
EQKEAYLPAE LGTPSKQPTN YFCKTLTASD TSTHGGFSVP RRAAEKVFPP LDFSQQPPAQ  180
ELIARDLHGN EWKFRHIFRG QPKRHLLTTG WSVFVSAKRL VAGDSVLFIW QCIFFNRNEK  240
NQLLLGIRRA NRPQTVMPSS VLSSDSMHLG LLAAAAHAAA TNSRFTIFYN PRASPSEFVI  300
PLAKYVKAVY HTRVSVGMRF RMLFETEESS VRRYMGTITG ISDLDPVRWQ NSHWRSVKVG  360
WDESTAGERQ PRVSLWEIEP LTTFPMYPSP FPLRLKRPWP PGLPSFHGMK DDDFGMNSPL  420
LWLRDSDRGL QTLNLPGIGV NHWMQPRFDP SMLNMQTDMY QAVAAAAVQD MRSLDPSKQH  480
SASLLQFQQP QNFPNRTAAL MQAQMLQQSQ PQQIFGNNQE NQHSPQSQPQ TQAHLQQHLQ  540
RQHSFNSQHH HHHHQQQQLQ QPTQQQQQQQ VVENQQISSA VSTMSQFVSA AQPSSPPMQA  600
ISSLCQQQNF SDSNGNPVAT IVSPLHSILG SFPQDEASHL LNLPRTSSWI PVQNSSAWPS  660
KRVAVDPLLS SGASQCVLPQ VEQLGQPQST MSQNAITLPP FPGRECSIDQ EGSNDPQHHL  720
LFGVNIEPSS LLMPNAMSSL KGVSGNNDSS TLPYQSSNYL NTTTGNDSSL NHGMTQTIGE  780
SGFLQSPENA GQGNPLNKTF VKVYKSGSFG RSLDITKFSS YHELRGELAR MFGLEGELED  840
PMRSGWQLVF VDRENDVLLL GDGPWPEFVN SVWCIKILSP QEVQQMGNSG LELLNSVPIQ  900
RLSNGICDDY VSRQDPRNLC TGITTVGSLD Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein