PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RDX76868.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 303aa MW: 33679.5 Da PI: 9.7763 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 62.1 | 1.1e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++lv +v+++G g+W++++++ g+ R++k+c++rw +yl RDX76868.1 14 KGPWTSEEDKKLVAYVEKHGHGNWRSVPAKAGLERCGKSCRLRWINYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.7 | 1.7e-15 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ eEd +++++++lG++ W+ Ia+++ +Rt++++k++w++ RDX76868.1 67 RGNFSSEEDHTIIQLHALLGNK-WSIIAAHLH-KRTDNEIKNYWNTN 111 89********************.*********.***********986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 303 aa Download sequence |
MGRVPCCQKV GLKKGPWTSE EDKKLVAYVE KHGHGNWRSV PAKAGLERCG KSCRLRWINY 60 LKPDIKRGNF SSEEDHTIIQ LHALLGNKWS IIAAHLHKRT DNEIKNYWNT NLKKRLIRMG 120 LDPVTHKPIK PNTFQAYGGG HGQSKVTINM GHVAQWESAR LEAEARGSML QVGSGYSSHL 180 PRLILSKIPT QLPLSTEHKT MYNMYALVLA TNHDLLSPVS TLSIPSRKLP AVSSSTHTES 240 SHGNVIKTSS QIQNSIIGGN MSSLEDDDIM VAVEAFRTAR SESLHELFDE STAMEGIDVL 300 ALK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G15310.1 | 1e-85 | MYB family protein |