PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX76288.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | GATA | ||||||||
Protein Properties | Length: 383aa MW: 42039 Da PI: 6.825 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 59.2 | 5.3e-19 | 301 | 335 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs+Cg+ kTp+WR gp g+ktLCnaCG++y++ +l RDX76288.1 301 CSHCGVQKTPQWRTGPLGPKTLCNACGVRYKSGRL 335 *******************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 383 aa Download sequence |
MLRVETTLVS GDTDTAQKVK LGIHNKEAHF SPHSMLYQTH HPPLFQFHPF TSSTTPHLST 60 TPSYLPSLLL SQAETEMECL EAALKSSVRK DTTLKLSPQT FLEELTALNV QNVASCDDFF 120 VDDLLDFSLL EKEEPDQHNH DSACVSPQNK NQEIYNYNPS FNDHFTSELT VPAEEVADLE 180 WLSHFVEDSF SEHSISFPVV TATQSLAEKA PEPGNTGFTF KTPVPAKARS KRTRTGVRVW 240 PLRSPSFTDT SSTSSSSSSS SSPSSPLLIC AAATPSLDPE EKRAKKRAAP DGGAVQTARR 300 CSHCGVQKTP QWRTGPLGPK TLCNACGVRY KSGRLLPEYR PACSPTFSSE LHSNHHRKVL 360 EMRRKNEVAA GPDAGSTPSV PGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66320.2 | 5e-68 | GATA family protein |