PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX76288.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family GATA
Protein Properties Length: 383aa    MW: 42039 Da    PI: 6.825
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX76288.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.25.3e-19301335135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 Cs+Cg+ kTp+WR gp g+ktLCnaCG++y++ +l
  RDX76288.1 301 CSHCGVQKTPQWRTGPLGPKTLCNACGVRYKSGRL 335
                 *******************************9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MLRVETTLVS GDTDTAQKVK LGIHNKEAHF SPHSMLYQTH HPPLFQFHPF TSSTTPHLST  60
TPSYLPSLLL SQAETEMECL EAALKSSVRK DTTLKLSPQT FLEELTALNV QNVASCDDFF  120
VDDLLDFSLL EKEEPDQHNH DSACVSPQNK NQEIYNYNPS FNDHFTSELT VPAEEVADLE  180
WLSHFVEDSF SEHSISFPVV TATQSLAEKA PEPGNTGFTF KTPVPAKARS KRTRTGVRVW  240
PLRSPSFTDT SSTSSSSSSS SSPSSPLLIC AAATPSLDPE EKRAKKRAAP DGGAVQTARR  300
CSHCGVQKTP QWRTGPLGPK TLCNACGVRY KSGRLLPEYR PACSPTFSSE LHSNHHRKVL  360
EMRRKNEVAA GPDAGSTPSV PGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.25e-68GATA family protein