PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX76231.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | GATA | ||||||||
Protein Properties | Length: 160aa MW: 17021.3 Da PI: 10.4808 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 59.4 | 4.5e-19 | 57 | 90 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C+ CgttkTplWR gp g+k+LCnaCG++ rkk+ RDX76231.1 57 CADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKK 90 ********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
MLIPSRNQIG FLGIESQISE IRMVDPSGKV SVGVGSEAAE DSNPNAPSSG SEQKKTCADC 60 GTTKTPLWRG GPAGPKSLCN ACGIRSRKKK RAILGISKGS TDDVRKGKRN INNNNSNSNA 120 NGGPALRREV LLHRSHWKKL GEEEKAAVLL MSLSYGSVYA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49300.1 | 1e-35 | GATA family protein |