PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX76197.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | GATA | ||||||||
Protein Properties | Length: 135aa MW: 15725.2 Da PI: 10.6878 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 36 | 9.9e-12 | 6 | 30 | 9 | 33 |
GATA 9 TplWRrgpdgnktLCnaCGlyyrkk 33 +plWR+gp+ ++ LCnaCG +y+k RDX76197.1 6 SPLWRSGPEDKPVLCNACGSRYKKW 30 8*******88888**********95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MVLPVSPLWR SGPEDKPVLC NACGSRYKKW GNLERYLPNH FQPKHLDKLK SLKGSRSNLL 60 VSSYETGGKT ARLWSPKIPS RKRSRVVYQK ITPMKRFHKQ LLSMWENYGN PNESSPEEHI 120 HMVRNSNHLP YGEKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17570.2 | 1e-10 | GATA family protein |