PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX75949.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | GATA | ||||||||
Protein Properties | Length: 310aa MW: 34666.5 Da PI: 6.1765 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 55.4 | 8.3e-18 | 201 | 235 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C t kTp+WR gp g+ktLCnaCG++y++ +l RDX75949.1 201 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 235 99*****************************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MEAQEFFQNT FCPQFPSDNM TPSNANASAA DHFIVEDFFD FSNDDEPAIT DATFDSLPTD 60 DSSTVTPVDS STKSNFPTPD GHFSGDLSVP YDDLAELEWL SKFADESFSN EDLQKMQLIS 120 GVRVQNDAAA SSQRRDGDPN LVFNPQVSVP GKARSKRFRG PPCNWTSRLV VLSPTTSHSD 180 SVKKPAPRRR DAAEGGEGRK CLHCATDKTP QWRTGPMGPK TLCNACGVRY KSGRLVPEYR 240 PASSPTFMLT KHSNSHRKVL ELRRQKEMVR VQQQQLLQLQ HQQNMMFDVA SNGDDYLIHQ 300 HVGPDFTHLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25830.1 | 7e-81 | GATA family protein |