PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX75949.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family GATA
Protein Properties Length: 310aa    MW: 34666.5 Da    PI: 6.1765
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX75949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.48.3e-18201235135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  RDX75949.1 201 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 235
                 99*****************************9885 PP

Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MEAQEFFQNT FCPQFPSDNM TPSNANASAA DHFIVEDFFD FSNDDEPAIT DATFDSLPTD  60
DSSTVTPVDS STKSNFPTPD GHFSGDLSVP YDDLAELEWL SKFADESFSN EDLQKMQLIS  120
GVRVQNDAAA SSQRRDGDPN LVFNPQVSVP GKARSKRFRG PPCNWTSRLV VLSPTTSHSD  180
SVKKPAPRRR DAAEGGEGRK CLHCATDKTP QWRTGPMGPK TLCNACGVRY KSGRLVPEYR  240
PASSPTFMLT KHSNSHRKVL ELRRQKEMVR VQQQQLLQLQ HQQNMMFDVA SNGDDYLIHQ  300
HVGPDFTHLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.17e-81GATA family protein