PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX75107.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

ARF

Protein Properties

Length: 672aa MW: 74502 Da PI: 7.9218

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX75107.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.2	3.3e-23	113	214	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + + +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + +++ l RDX75107.1 113 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--NILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFL--RAENGDL 207 89**************************997656666..69999****************************************..4488999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ RDX75107.1 208 CVGIRRA 214 **997 PP
2	Auxin_resp	110.8	1.4e-36	274	356	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Prast+eF+vk++ v++al++++++GmRfkm fetedss++++ +Gt+++v+ +dp rWp+S+Wr+L+ RDX75107.1 274 AATLAANMQPFEVVYYPRASTPEFCVKASLVRAALQIRWCPGMRFKMPFETEDSSRISWfMGTISSVNVADP-RWPDSPWRLLQ 356 68899*****************************************************************.*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 672 aa Download sequence
MESKENLKEV GKCLDPQLWH ACAGGMVQMP VVNARVFYFP QGHAEHACGP VDFRAYPKIP 60 PFIQCRVGDI KYMADSETDE VYSKLRLLPL TTNDDDFEDD GNGSETKDKP PSFAKTLTQS 120 DANNGGGFSV PRYCAETIFP RLDYSADPPV QNILAKDVHG ETWKFRHIYR GTPRRHLLTT 180 GWSTFVNHKK LVAGDSIVFL RAENGDLCVG IRRAKRGGAG GLEAPSGWNS AGTIRSATYG 240 GFSAFLKEDD SQLSRNGSNP RGRGKVKSEA VIEAATLAAN MQPFEVVYYP RASTPEFCVK 300 ASLVRAALQI RWCPGMRFKM PFETEDSSRI SWFMGTISSV NVADPRWPDS PWRLLQVTWD 360 EPELLQNVKR VSPWLVEIVS NMPTIHLSPF SPPRKKLRLP QQTEFSLDGQ ISLPAFPSNF 420 LGPSNPFGCL PESNPAGMQG ARHANYGISL SNVHFNKLNS GLFQAGFPPL DHTTASPKRR 480 VSNTPPLQKP TTSDNISCLL SMSTSTQSSN KVDHVKTTQL VLFGQKILAK QQISADTDPT 540 HNTSPDENAD KMTKLSDAYG STLHSQHSSF QWYKDHPKET VTSLETGQCK VFLESEDIGR 600 TIDLSLLGSY DELYRKLADM FGIEKSAVRS HVLYRDTTGS VKQIGDQEFS DFAKTARRLV 660 ILMDSSSDSR GT

Sequence ? help Back to Top

Protein Sequence Length: 672 aa Download sequence

MESKENLKEV GKCLDPQLWH ACAGGMVQMP VVNARVFYFP QGHAEHACGP VDFRAYPKIP  60
PFIQCRVGDI KYMADSETDE VYSKLRLLPL TTNDDDFEDD GNGSETKDKP PSFAKTLTQS  120
DANNGGGFSV PRYCAETIFP RLDYSADPPV QNILAKDVHG ETWKFRHIYR GTPRRHLLTT  180
GWSTFVNHKK LVAGDSIVFL RAENGDLCVG IRRAKRGGAG GLEAPSGWNS AGTIRSATYG  240
GFSAFLKEDD SQLSRNGSNP RGRGKVKSEA VIEAATLAAN MQPFEVVYYP RASTPEFCVK  300
ASLVRAALQI RWCPGMRFKM PFETEDSSRI SWFMGTISSV NVADPRWPDS PWRLLQVTWD  360
EPELLQNVKR VSPWLVEIVS NMPTIHLSPF SPPRKKLRLP QQTEFSLDGQ ISLPAFPSNF  420
LGPSNPFGCL PESNPAGMQG ARHANYGISL SNVHFNKLNS GLFQAGFPPL DHTTASPKRR  480
VSNTPPLQKP TTSDNISCLL SMSTSTQSSN KVDHVKTTQL VLFGQKILAK QQISADTDPT  540
HNTSPDENAD KMTKLSDAYG STLHSQHSSF QWYKDHPKET VTSLETGQCK VFLESEDIGR  600
TIDLSLLGSY DELYRKLADM FGIEKSAVRS HVLYRDTTGS VKQIGDQEFS DFAKTARRLV  660
ILMDSSSDSR GT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein