PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX73932.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family AP2
Protein Properties Length: 572aa    MW: 63903.2 Da    PI: 8.4511
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX73932.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.83e-09192248155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++gr++A+++d  +     ++ k  + g ++ +e+A + ++ a++k++g
  RDX73932.1 192 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGKQ-GGYDKEEKAGRTYDLAALKYWG 248
                 57*******************5544.2354448888.669999**************98 PP
2AP248.22.8e-15312363155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV+++++ grW A+I  +     +k ++lg+f t eeAa+a++ a+ k++g
  RDX73932.1 312 SIYRGVTRHHQHGRWQARIGRVAG---NKDVYLGTFSTQEEAAEAYDVAAIKFRG 363
                 57****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    
MASINWLLDF SRSPQELPPQ TANNEDRSQT VTPHEITATD CFDLTSFGLV EALNRNNTHH  60
ITSPDWDTKG LGTSCSSNKN MDNQQHLKLE NFLSKKPATG GGGSPKHTNS IGLSMIKTWL  120
RNQTSPSDAA NTSLSMSTAV SQSGTVALPL LTVDGESKKQ PSTTALDNNQ SGTVNVSTVP  180
RKSADILGQR TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ TRKGKQGGYD KEEKAGRTYD  240
LAALKYWGTT TTTNFPVNST FSLSLTFCLP LILVKFIISH YEKELEEMKN MTRQEYVASL  300
RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDVY LGTFSTQEEA AEAYDVAAIK  360
FRGLKAVTNF DMSKYNVRSI LESSTLPIGG AAKRLKDVEQ VDHTIMDPQT AHMYDSNINS  420
FGAPHPLAFH QPHPYYSHLN YTNGQKFWCK QKQDYGVPQS FQDIHQLQLG NTHNFLQSNN  480
SASIDCGSNS DIYGGGHGYV IPVATTFIDD VNQNNRSNDF EDNDVKMFSY ENLRVVHMMH  540
NNTWVPTIPT LAPRHSNVAL CPEASLFILL HE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17430.11e-127AP2 family protein