PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX73796.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 227aa MW: 25954.3 Da PI: 6.0972 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.7 | 1.8e-15 | 24 | 71 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEde l+ +v +G g+W+ + + g+ R++k+c++rw ++l RDX73796.1 24 KGPWTREEDEVLASYVSIHGVGNWNIVQKNTGLARCGKSCRLRWTNHL 71 79*******************************************996 PP | |||||||
2 | Myb_DNA-binding | 46.3 | 9.5e-15 | 77 | 120 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++ eE+ + +++++ lG++ W++ a++++ gRt++++k++w++ RDX73796.1 77 RGAFSDEEQRKVIELHASLGSK-WAKMAQELP-GRTDNEIKNFWNT 120 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MCTLPHGGEN SDKDQAVEES GFKKGPWTRE EDEVLASYVS IHGVGNWNIV QKNTGLARCG 60 KSCRLRWTNH LRPDLKRGAF SDEEQRKVIE LHASLGSKWA KMAQELPGRT DNEIKNFWNT 120 RLKKRRRLGL PVYPDDIKPM LNDSEAFPLP ELIFDDCNFD LERETLCMPS TSFGPENSIF 180 EQQISDNPIM HHPKPISIVP ENSIFEQQIS DNPIMHHPKP ISIVPEN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 122 | 128 | LKKRRRL |
2 | 124 | 128 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26960.1 | 2e-64 | MYB family protein |