PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX73653.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | GATA | ||||||||
Protein Properties | Length: 184aa MW: 20781.3 Da PI: 7.6982 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 46.5 | 4.9e-15 | 141 | 177 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg ++ Tp++Rrgp+g+ +LCnaCGl ++ +g+ RDX73653.1 141 CTHCGISSkcTPMMRRGPSGPGSLCNACGLSWANRGV 177 ******999************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MDFGDGFGLI SEDDDLWLSF LELENAHSDS TTTFVLEDQY LHNCSLLQCV ETPPQNQKAA 60 KEMEYPNDGR CSESRRAASL NRFRQKRKQR CFANKIRYTA RQEATLKVHR SKAQLILSRK 120 HDGPNSFHDS GQDEIQSEIL CTHCGISSKC TPMMRRGPSG PGSLCNACGL SWANRGVFNY 180 EKAV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 84 | 90 | RQKRKQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24470.2 | 3e-43 | GATA family protein |