PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX73264.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 776aa MW: 86344.5 Da PI: 5.9142

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX73264.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.1	2.2e-21	103	158	1	56
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+k +++t+eq++e+e+lF+++++p++++r++L+k+lgL rqVk+WFqNrR++ k RDX73264.1 103 RKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 158 7999************************************************9877 PP
2	START	229.4	1e-71	274	496	4	206
HHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECT CS START 4 eeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.......dsgealrasgvvdmvlallveellddkeqWdetla....kaetleviss 87 ++a++el+k+a+ +ep+W +s e++n+de++++f+ +++ +s+ea+r++gvv+ +l++lv+++ld++ qW+e+++ ka+t++vi++ RDX73264.1 274 NQAMEELIKMATMGEPLWLRSFetgrEILNYDEYMKEFAVENSstggrpkRSIEASRDTGVVFVDLPRLVQSFLDVN-QWKEMFPclisKAATVDVICN 371 689****************99***********9888899****************************.***************** PP T......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHH CS START 88 g......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphw 179 g ga+qlm+aelq+l+p+vp R+++fvRy++ql+a++w+ivdvS+d +++ ++s+v+++++pSg++ie+ksngh+kv+wveh +++++ +h+ RDX73264.1 372 GegpnrnGAVQLMFAELQMLTPMVPtREVYFVRYSKQLSAEQWAIVDVSIDKVEDNI-DASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSAVHS 469 ***************************************************98.9************************************ PP HHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 180 llrslvksglaegaktwvatlqrqcek 206 ++r +v+sgla+ga++wvat+q qce+ RDX73264.1 470 MYRTIVNSGLAFGARHWVATVQLQCER 496 ***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 776 aa Download sequence
MGADMSNNQP PTSHAKDFFA SPALSLSLAG IFRHAGVAPA PHAATSNMEV EEGEEGSGGG 60 ERLEEISSEN SGPTRSRSED DFEGEGEHDD DDGDGDKNKK KKRKKYHRHT AEQIREMEAL 120 FKESPHPDEK QRQQLSKQLG LAPRQVKFWF QNRRTQIKAI QERHENSLLK SEIEKLKEKN 180 KSFRETINKA CCPNCGVHTT SRDSAMPTEE QQLRIENAKL KAEVEKLRAA LGKYAPGTTS 240 PSCSSGHDQE NRSSLDFYTG IFGLDKSRIM DIVNQAMEEL IKMATMGEPL WLRSFETGRE 300 ILNYDEYMKE FAVENSSTGG RPKRSIEASR DTGVVFVDLP RLVQSFLDVN QWKEMFPCLI 360 SKAATVDVIC NGEGPNRNGA VQLMFAELQM LTPMVPTREV YFVRYSKQLS AEQWAIVDVS 420 IDKVEDNIDA SLVKCRKRPS GCIIEDKSNG HCKVIWVEHL ECQKSAVHSM YRTIVNSGLA 480 FGARHWVATV QLQCERLVFF MATNVPMKDS TGVATLAGRK SILKLAQRMT WNFCHSIGAS 540 SFHTWTKVTS KTGEDVRISS RKNLNDPGEP LGLILCAVCS VWLPVSPNVL FDFLRDETRR 600 TEWDIMSSGG TVQSIANLAK GQDRGNVVTI QTIKSNENSV WILQDSSTNP YESMVVYASV 660 DITGIQSVMT GCDSSNLAIL PSGFSIIPDG LESRPLVITS RQEEKNTEGG SLFTMAFQIL 720 TNASPTAKLT MESVDSVNTL VSCTLRNIRT SLQCEDDFNS VLCGWFEGSD CELSTN

Sequence ? help Back to Top

Protein Sequence Length: 776 aa Download sequence

MGADMSNNQP PTSHAKDFFA SPALSLSLAG IFRHAGVAPA PHAATSNMEV EEGEEGSGGG  60
ERLEEISSEN SGPTRSRSED DFEGEGEHDD DDGDGDKNKK KKRKKYHRHT AEQIREMEAL  120
FKESPHPDEK QRQQLSKQLG LAPRQVKFWF QNRRTQIKAI QERHENSLLK SEIEKLKEKN  180
KSFRETINKA CCPNCGVHTT SRDSAMPTEE QQLRIENAKL KAEVEKLRAA LGKYAPGTTS  240
PSCSSGHDQE NRSSLDFYTG IFGLDKSRIM DIVNQAMEEL IKMATMGEPL WLRSFETGRE  300
ILNYDEYMKE FAVENSSTGG RPKRSIEASR DTGVVFVDLP RLVQSFLDVN QWKEMFPCLI  360
SKAATVDVIC NGEGPNRNGA VQLMFAELQM LTPMVPTREV YFVRYSKQLS AEQWAIVDVS  420
IDKVEDNIDA SLVKCRKRPS GCIIEDKSNG HCKVIWVEHL ECQKSAVHSM YRTIVNSGLA  480
FGARHWVATV QLQCERLVFF MATNVPMKDS TGVATLAGRK SILKLAQRMT WNFCHSIGAS  540
SFHTWTKVTS KTGEDVRISS RKNLNDPGEP LGLILCAVCS VWLPVSPNVL FDFLRDETRR  600
TEWDIMSSGG TVQSIANLAK GQDRGNVVTI QTIKSNENSV WILQDSSTNP YESMVVYASV  660
DITGIQSVMT GCDSSNLAIL PSGFSIIPDG LESRPLVITS RQEEKNTEGG SLFTMAFQIL  720
TNASPTAKLT MESVDSVNTL VSCTLRNIRT SLQCEDDFNS VLCGWFEGSD CELSTN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	99	104	KKKKRK
2	99	105	KKKKRKK
3	101	105	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79840.1	0.0	HD-ZIP family protein