PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX72895.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB_related | ||||||||
Protein Properties | Length: 158aa MW: 19224 Da PI: 10.2525 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.3 | 4.1e-14 | 14 | 57 | 4 | 48 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT++E+ l++++ k++ ++ W+ Iar++ +Rt+ q+ s++ ky+ RDX72895.1 14 WTEDEHRLFLQGLKLYKKN-WAYIARKVVRTRTATQVASHYKKYK 57 *****************88.***********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MPRLPVRNGR VIHWTEDEHR LFLQGLKLYK KNWAYIARKV VRTRTATQVA SHYKKYKLHK 60 KYTSVKQKKS RSILDITLKN DYQNISEHRS QQLLPQQPEL ERIQQFPQFI DRYYYNWVPT 120 PNEELPHHDQ QMFQELQQEL KPPNNMSPYE MNGFNSII |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 1e-10 | MYB family protein |